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Gene Expression Data
Assay Details
Assay
Reference: J:133947 Summerhurst K, et al., 3D representation of Wnt and Frizzled gene expression patterns in the mouse embryo at embryonic day 11.5 (Ts19). Gene Expr Patterns. 2008 May;8(5):331-48
Assay type: RNA in situ
MGI Accession ID: MGI:5448561
Gene symbol: Wnt5b
Gene name: wingless-type MMTV integration site family, member 5B
Probe: Wnt5b cDNA7
Probe preparation: Antisense RNA
Assay notes: These data are obtained from optical projection tomography (OPT).
Results
Specimen Table 1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: 1st branchial arch Present
TS19: 2nd branchial arch Present
TS19: 3rd branchial arch Present
TS19: 4th branchial arch Present
TS19: alimentary system Present
TS19: diencephalon Present
TS19: eye Present
TS19: forelimb bud ectoderm Present
TS19: forelimb bud mesenchyme Present
TS19: fronto-nasal process Present
TS19: hindbrain Present
TS19: midbrain Present
TS19: neural tube Present
TS19: reproductive system Present
TS19: surface ectoderm Present
TS19: tail Present
TS19: urinary system Present
TS19: inner ear Present Regionally restricted Otic vesicle.
Specimen Table 2: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present
TS19: forelimb bud ectoderm Present Regionally restricted Proximal epithelium.
Specimen Wnt5b first: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b first In two patches in ventral-proximal mesenchyme of limb.In two patches in ventral-proximal mesenchyme of limb.In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b first Ventral side of limb in area of posterior handplate.
Specimen Wnt5b second: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b second In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b second Ventral side of limb in area of posterior handplate.
Specimen Wnt5b third: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b third In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b third Ventral side of limb in area of posterior handplate.
Specimen Wnt5b fourth: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b fourth In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b fourth Ventral side of limb in area of posterior handplate.
Specimen Wnt5b fifth: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b fifth In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b fifth Ventral side of limb in area of posterior handplate.
Specimen Wnt5b sixth: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b sixth In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b sixth Ventral side of limb in area of posterior handplate.
Specimen Wnt5b seventh: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt5b seventh In two patches in ventral-proximal mesenchyme of limb.
TS19: forelimb bud ectoderm Weak Regionally restricted 5_Wnt5b seventh Ventral side of limb in area of posterior handplate.
Specimen Table S1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain floor plate Present
TS19: brain floor plate Present Regionally restricted In a localized part of floor plate (ventral midline) through neural tube from level of posterior otic vesicle. Strongest in the posterior hindbrain.
TS19: hindbrain floor plate Present Regionally restricted In a localized part of floor plate (ventral midline) through neural tube from level of posterior otic vesicle. Strongest in the posterior hindbrain.
TS19: neural tube floor plate Present Regionally restricted In a localized part of floor plate (ventral midline) through neural tube from level of posterior otic vesicle. Strongest in the posterior hindbrain.
TS19: 1st branchial arch Present Regionally restricted Lateral lingual swellings and posterior distal aspect of mandibular part.
TS19: nose Present Regionally restricted Medial margin of nasal pits.
TS19: forelimb bud mesenchyme Present Regionally restricted In two patches in ventral-proximal mesenchyme of limb.
TS19: handplate ectoderm Weak Regionally restricted Ventral side of limb in area of posterior handplate.
TS19: eye Present Regionally restricted Optic cup.
TS19: embryo mesenchyme Present Regionally restricted Mesenchyme surrounding lateral sides of foregut in pharangeal region and extending into entrance into 2nd branchial pouch. Complex pattern in mesenchyme surrounding foregut, level of 3rd branchial arch.
TS19: aortico-pulmonary spiral septum Very strong
TS19: stomach mesenchyme Present Patchy
TS19: trunk mesenchyme Present Regionally restricted Expression is around duodenum.
TS19: liver and biliary system Present Regionally restricted Cystic promordium.
TS19: pancreas primordium Present Regionally restricted Distal tip of pancreatic lobe.
TS19: reproductive system Present Regionally restricted Urogenital ridge.
TS19: urinary system Present Regionally restricted Urogenital ridge.
TS19: sclerotome Present Regionally restricted Scleratome/prevertebrae, particularly at and anterior to forelimb bud.
TS19: vertebral pre-cartilage condensation Present Regionally restricted Scleratome/prevertebrae, particularly at and anterior to forelimb bud.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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