Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:143778
Tamplin OJ, et al., Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord. Dev Biol. 2011 Dec 15;360(2):415-25
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:5291779
|
|
Gene symbol:
|
Grik3
|
|
Gene name:
|
glutamate receptor, ionotropic, kainate 3
|
|
Probe:
|
IMAGE clone 4035279
|
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
|
Visualized with:
|
Alkaline phosphatase
|
|
|
Results
|
Specimen
E7.75:
embryonic day 7.75
(more  )
Note: These data are reported in Table S2.
Specimen
E7.75:
(close  )
|
Genetic Background:
|
ICR
|
|
Age:
|
embryonic day 7.75
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
These data are reported in Table S2.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
Grik3-E7.75-ANT
,
Grik3-E7.75-POST
|
Expression is stronger in the hindbrain, hindgut, and notochord than elsewhere in the embryo.
|
| TS11: embryo endoderm |
Present |
Regionally restricted |
Grik3-E7.75-POST
,
Grik3-E7.75-ANT
|
Expression is stronger in the hindbrain, hindgut, and notochord than elsewhere in the embryo.
|
| TS11: notochordal plate |
Present |
Regionally restricted |
Grik3-E7.75-ANT
,
Grik3-E7.75-POST
|
Expression is stronger in the hindbrain, hindgut, and notochord than elsewhere in the embryo.
|
| TS11: embryo |
Present |
Widespread |
Grik3-E7.75-POST
,
Grik3-E7.75-ANT
|
|
Specimen
E8.5:
embryonic day 8.5
(more )
Note: These data are reported in Table S2.
Specimen
E8.5:
(close )
|
Genetic Background:
|
ICR
|
|
Age:
|
embryonic day 8.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
These data are reported in Table S2.
|
Specimen
E9.0:
embryonic day 9.0
(more )
Note: These data are reported in Table S2.
Specimen
E9.0:
(close )
|
Genetic Background:
|
ICR
|
|
Age:
|
embryonic day 9.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
These data are reported in Table S2.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS14: future hindbrain |
Present |
|
Grik3-E9.0-LAT
,
Grik3-E9.0-VD
|
Expression is stronger in the hindbrain, hindgut, and notochord than elsewhere in the embryo.
|
| TS14: hindgut diverticulum |
Present |
|
Grik3-E9.0-VD
,
Grik3-E9.0-LAT
|
Expression is stronger in the hindbrain, hindgut, and notochord than elsewhere in the embryo.
|
| TS14: notochord |
Present |
|
Grik3-E9.0-LAT
,
Grik3-E9.0-VD
|
Expression is stronger in the hindbrain, hindgut, and notochord than elsewhere in the embryo.
|
| TS14: embryo |
Present |
Widespread |
Grik3-E9.0-VD
,
Grik3-E9.0-LAT
|
|
|
Analysis Tools