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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4829272
Gene symbol: Zcchc18
Gene name: zinc finger, CCHC domain containing 18
Probe: MGC clone 28822
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000994_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_01
TS23: cornea stroma Weak Regionally restricted euxassay_000994_01
Specimen euxassay_000994_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_000994_02 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_02
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_02
TS23: cornea stroma Weak Regionally restricted euxassay_000994_02
Specimen euxassay_000994_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_03
TS23: stomach Weak Regionally restricted euxassay_000994_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_03
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_03
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_03
TS23: cornea stroma Weak Regionally restricted euxassay_000994_03
Specimen euxassay_000994_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_04
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_04
TS23: stomach Weak Regionally restricted euxassay_000994_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_04
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_04
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_04
TS23: cornea stroma Weak Regionally restricted euxassay_000994_04
Specimen euxassay_000994_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_05
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_05
TS23: stomach Weak Regionally restricted euxassay_000994_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_05
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_05
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_05
Specimen euxassay_000994_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_06
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_000994_06
TS23: stomach Weak Regionally restricted euxassay_000994_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_06
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_06
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_06
TS23: pons mantle layer Moderate Uniform euxassay_000994_06
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_06
Specimen euxassay_000994_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_07
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_000994_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000994_07
TS23: stomach Weak Regionally restricted euxassay_000994_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_07
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_07
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_07
TS23: pons mantle layer Moderate Uniform euxassay_000994_07
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_07
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_07
Specimen euxassay_000994_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_08
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000994_08
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_000994_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_08
TS23: stomach Weak Regionally restricted euxassay_000994_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_08
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_08
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_08
TS23: pons mantle layer Moderate Uniform euxassay_000994_08
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_08
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_08
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_08
Specimen euxassay_000994_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_09
TS23: vagus ganglion Moderate Regionally restricted euxassay_000994_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_09
TS23: renal calyx Weak Regionally restricted euxassay_000994_09
TS23: stomach Weak Regionally restricted euxassay_000994_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_09
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_09
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_09
TS23: pons mantle layer Moderate Uniform euxassay_000994_09
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_09
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_09
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_09
Specimen euxassay_000994_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_10
TS23: vagus ganglion Moderate Regionally restricted euxassay_000994_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_10
TS23: adrenal gland Weak Regionally restricted euxassay_000994_10
TS23: renal calyx Weak Regionally restricted euxassay_000994_10
TS23: stomach Weak Regionally restricted euxassay_000994_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_10
TS23: telencephalon mantle layer Moderate Uniform euxassay_000994_10
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_10
TS23: pons mantle layer Moderate Uniform euxassay_000994_10
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_10
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_10
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_10
Specimen euxassay_000994_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_11
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_000994_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_11
TS23: adrenal gland Weak Regionally restricted euxassay_000994_11
TS23: renal calyx Weak Regionally restricted euxassay_000994_11
TS23: stomach Weak Regionally restricted euxassay_000994_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_11
TS23: pancreas Moderate Regionally restricted euxassay_000994_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_11
TS23: pons mantle layer Moderate Uniform euxassay_000994_11
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_11
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_11
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_11
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_11
Specimen euxassay_000994_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_12
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_000994_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_12
TS23: adrenal gland Weak Regionally restricted euxassay_000994_12
TS23: renal calyx Weak Regionally restricted euxassay_000994_12
TS23: stomach Weak Regionally restricted euxassay_000994_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_000994_12
TS23: pancreas Moderate Regionally restricted euxassay_000994_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_12
TS23: pons mantle layer Moderate Uniform euxassay_000994_12
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_12
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_12
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_12
Specimen euxassay_000994_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_000994_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_13
TS23: pancreas Moderate Regionally restricted euxassay_000994_13
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_13
TS23: pons mantle layer Moderate Uniform euxassay_000994_13
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_13
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_13
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_000994_13
Specimen euxassay_000994_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Moderate Regionally restricted euxassay_000994_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_14
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_14
TS23: pons mantle layer Moderate Uniform euxassay_000994_14
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_14
TS23: midbrain marginal layer Moderate Uniform euxassay_000994_14
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_14
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_14
Specimen euxassay_000994_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Moderate Regionally restricted euxassay_000994_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_15
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_15
TS23: pons mantle layer Moderate Uniform euxassay_000994_15
TS23: midbrain marginal layer Moderate Uniform euxassay_000994_15
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_15
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_15
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_15
Specimen euxassay_000994_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Moderate Regionally restricted euxassay_000994_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_16
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_16
TS23: pons mantle layer Moderate Uniform euxassay_000994_16
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_16
TS23: midbrain marginal layer Moderate Uniform euxassay_000994_16
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_16
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_16
Specimen euxassay_000994_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_000994_17
TS23: thoracic ganglion Moderate Regionally restricted euxassay_000994_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_17
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_17
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_17
TS23: pons mantle layer Moderate Uniform euxassay_000994_17
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_17
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_17
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_17
Specimen euxassay_000994_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_000994_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_000994_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_18
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_000994_18
TS23: thoracic ganglion Moderate Regionally restricted euxassay_000994_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_18
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_18
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_18
TS23: pons mantle layer Moderate Uniform euxassay_000994_18
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_18
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_18
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_18
Specimen euxassay_000994_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_000994_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_19
TS23: vagus ganglion Moderate Regionally restricted euxassay_000994_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_19
TS23: adrenal gland Weak Regionally restricted euxassay_000994_19
TS23: renal calyx Weak Regionally restricted euxassay_000994_19
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_000994_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_19
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_19
TS23: pons mantle layer Moderate Uniform euxassay_000994_19
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_19
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_000994_19
TS23: hypothalamus mantle layer Moderate Uniform euxassay_000994_19
Specimen euxassay_000994_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000994_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_20
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_20
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_000994_20
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000994_20
TS23: olfactory epithelium Weak Regionally restricted euxassay_000994_20
TS23: adrenal gland Weak Regionally restricted euxassay_000994_20
TS23: renal calyx Weak Regionally restricted euxassay_000994_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_20
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_20
TS23: pons mantle layer Moderate Uniform euxassay_000994_20
TS23: midbrain mantle layer Moderate Uniform euxassay_000994_20
Specimen euxassay_000994_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_21
TS23: vagus ganglion Moderate Regionally restricted euxassay_000994_21
TS23: adrenal gland Weak Regionally restricted euxassay_000994_21
TS23: renal calyx Weak Regionally restricted euxassay_000994_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_21
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_21
Specimen euxassay_000994_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_22
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_22
TS23: renal calyx Weak Regionally restricted euxassay_000994_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_22
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_22
Specimen euxassay_000994_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_23
TS23: facial ganglion Moderate Regionally restricted euxassay_000994_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_23
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_000994_23
Specimen euxassay_000994_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000994_24
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000994_24
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_000994_24
TS23: cornea stroma Weak Regionally restricted euxassay_000994_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory