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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828890
Gene symbol: Trak1
Gene name: trafficking protein, kinesin binding 1
Probe: T31739
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009992_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_02
Specimen euxassay_009992_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_03
Specimen euxassay_009992_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_04
Specimen euxassay_009992_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_05
TS23: facial ganglion Weak Regionally restricted euxassay_009992_05
Specimen euxassay_009992_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_06
TS23: facial ganglion Weak Regionally restricted euxassay_009992_06
Specimen euxassay_009992_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_07
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_07
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_009992_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_009992_07
Specimen euxassay_009992_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_08
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_08
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_08
TS23: vagus ganglion Weak Regionally restricted euxassay_009992_08
Specimen euxassay_009992_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_09
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_09
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_09
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_009992_09
Specimen euxassay_009992_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_10
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_10
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_009992_10
Specimen euxassay_009992_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_11
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_11
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_11
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_009992_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_11
Specimen euxassay_009992_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_12
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_12
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_009992_12
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_009992_12
Specimen euxassay_009992_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_13
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_13
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_13
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_13
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_009992_13
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_009992_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_13
Specimen euxassay_009992_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_14
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_14
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_14
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_009992_14
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_009992_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_14
Specimen euxassay_009992_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_15
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_009992_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009992_15
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_009992_15
Specimen euxassay_009992_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_16
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_16
Specimen euxassay_009992_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_17
TS23: pons ventricular layer Weak Regionally restricted euxassay_009992_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_17
Specimen euxassay_009992_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009992_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_18
TS23: vagus ganglion Weak Regionally restricted euxassay_009992_18
Specimen euxassay_009992_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_19
TS23: vagus ganglion Weak Regionally restricted euxassay_009992_19
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_009992_19
Specimen euxassay_009992_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_20
Specimen euxassay_009992_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_21
TS23: facial ganglion Weak Regionally restricted euxassay_009992_21
TS23: submandibular gland primordium Weak Regionally restricted euxassay_009992_21
Specimen euxassay_009992_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_22
Specimen euxassay_009992_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_23
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009992_23
Specimen euxassay_009992_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009992_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory