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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828327
Gene symbol: Smc4
Gene name: structural maintenance of chromosomes 4
Probe: T63345
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015934_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_01
TS23: liver Weak Regionally restricted euxassay_015934_01
Specimen euxassay_015934_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_02
TS23: liver Weak Regionally restricted euxassay_015934_02
Specimen euxassay_015934_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_03
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_03
TS23: liver Weak Regionally restricted euxassay_015934_03
Specimen euxassay_015934_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_04
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_04
TS23: vibrissa Weak Regionally restricted euxassay_015934_04
TS23: liver Weak Regionally restricted euxassay_015934_04
Specimen euxassay_015934_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_05
TS23: vibrissa Weak Regionally restricted euxassay_015934_05
TS23: liver Weak Regionally restricted euxassay_015934_05
Specimen euxassay_015934_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_015934_06
TS23: vibrissa Weak Regionally restricted euxassay_015934_06
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_015934_06
TS23: liver Weak Regionally restricted euxassay_015934_06
TS23: lung Weak Regionally restricted euxassay_015934_06
Specimen euxassay_015934_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_07
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_015934_07
TS23: metanephros Weak Regionally restricted euxassay_015934_07
TS23: liver Weak Regionally restricted euxassay_015934_07
TS23: lung Weak Regionally restricted euxassay_015934_07
Specimen euxassay_015934_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_08
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_015934_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015934_08
TS23: metanephros Weak Regionally restricted euxassay_015934_08
TS23: liver Weak Regionally restricted euxassay_015934_08
TS23: lung Weak Regionally restricted euxassay_015934_08
Specimen euxassay_015934_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_09
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_09
TS23: upper jaw incisor Moderate Regionally restricted euxassay_015934_09
TS23: lower jaw incisor Moderate Regionally restricted euxassay_015934_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_015934_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015934_09
TS23: metanephros Weak Regionally restricted euxassay_015934_09
TS23: liver Weak Regionally restricted euxassay_015934_09
TS23: lung Weak Regionally restricted euxassay_015934_09
Specimen euxassay_015934_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_10
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_015934_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_10
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_015934_10
TS23: vomeronasal organ Weak Regionally restricted euxassay_015934_10
TS23: liver Weak Regionally restricted euxassay_015934_10
TS23: lung Weak Regionally restricted euxassay_015934_10
Specimen euxassay_015934_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_11
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_015934_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_11
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_015934_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_015934_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_015934_11
TS23: metanephros Weak Regionally restricted euxassay_015934_11
TS23: liver Weak Regionally restricted euxassay_015934_11
TS23: lung Weak Regionally restricted euxassay_015934_11
Specimen euxassay_015934_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_015934_12
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_015934_12
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_015934_12
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_015934_12
TS23: liver Weak Regionally restricted euxassay_015934_12
TS23: lung Weak Regionally restricted euxassay_015934_12
Specimen euxassay_015934_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_015934_13
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_015934_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_015934_13
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_015934_13
TS23: liver Weak Regionally restricted euxassay_015934_13
TS23: lung Weak Regionally restricted euxassay_015934_13
Specimen euxassay_015934_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_015934_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_015934_14
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_015934_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_015934_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_015934_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_015934_14
TS23: vomeronasal organ Weak Regionally restricted euxassay_015934_14
TS23: liver Weak Regionally restricted euxassay_015934_14
TS23: lung Weak Regionally restricted euxassay_015934_14
Specimen euxassay_015934_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_015934_15
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_015934_15
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_015934_15
TS23: upper jaw incisor Weak Regionally restricted euxassay_015934_15
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_015934_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_015934_15
TS23: liver Weak Regionally restricted euxassay_015934_15
TS23: lung Weak Regionally restricted euxassay_015934_15
Specimen euxassay_015934_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_16
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_015934_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_16
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_015934_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_015934_16
TS23: metanephros Weak Regionally restricted euxassay_015934_16
TS23: liver Weak Regionally restricted euxassay_015934_16
TS23: lung Weak Regionally restricted euxassay_015934_16
Specimen euxassay_015934_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_17
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_17
TS23: upper jaw molar Weak Regionally restricted euxassay_015934_17
TS23: lower jaw molar Weak Regionally restricted euxassay_015934_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_015934_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015934_17
TS23: metanephros Weak Regionally restricted euxassay_015934_17
TS23: liver Weak Regionally restricted euxassay_015934_17
TS23: lung Weak Regionally restricted euxassay_015934_17
Specimen euxassay_015934_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_015934_18
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_18
TS23: upper jaw molar Weak Regionally restricted euxassay_015934_18
TS23: lower jaw molar Weak Regionally restricted euxassay_015934_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_015934_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015934_18
TS23: metanephros Weak Regionally restricted euxassay_015934_18
TS23: liver Weak Regionally restricted euxassay_015934_18
TS23: lung Weak Regionally restricted euxassay_015934_18
Specimen euxassay_015934_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_19
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_19
TS23: vibrissa Weak Regionally restricted euxassay_015934_19
TS23: upper jaw molar Weak Regionally restricted euxassay_015934_19
TS23: metanephros Weak Regionally restricted euxassay_015934_19
TS23: liver Weak Regionally restricted euxassay_015934_19
TS23: lung Weak Regionally restricted euxassay_015934_19
Specimen euxassay_015934_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_20
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_015934_20
TS23: vibrissa Weak Regionally restricted euxassay_015934_20
TS23: metanephros Weak Regionally restricted euxassay_015934_20
TS23: liver Weak Regionally restricted euxassay_015934_20
TS23: lung Weak Regionally restricted euxassay_015934_20
Specimen euxassay_015934_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_21
TS23: vibrissa Weak Regionally restricted euxassay_015934_21
TS23: liver Weak Regionally restricted euxassay_015934_21
TS23: lung Weak Regionally restricted euxassay_015934_21
Specimen euxassay_015934_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_22
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_22
TS23: liver Weak Regionally restricted euxassay_015934_22
TS23: lung Weak Regionally restricted euxassay_015934_22
Specimen euxassay_015934_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_23
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_23
TS23: liver Weak Regionally restricted euxassay_015934_23
Specimen euxassay_015934_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015934_24
TS23: telencephalon ventricular layer Strong Uniform euxassay_015934_24
TS23: liver Weak Regionally restricted euxassay_015934_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory