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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828319
Gene symbol: Smarca1
Gene name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Probe: T36856
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012282_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_012282_03
Specimen euxassay_012282_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_012282_04
Specimen euxassay_012282_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_012282_05
Specimen euxassay_012282_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_012282_06
Specimen euxassay_012282_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_012282_07
Specimen euxassay_012282_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_012282_08
Specimen euxassay_012282_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_10
Specimen euxassay_012282_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_11
Specimen euxassay_012282_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_12
TS23: hindgut Weak Regionally restricted euxassay_012282_12
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_012282_12
TS23: metencephalon floor plate Strong Regionally restricted euxassay_012282_12
Specimen euxassay_012282_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_13
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_012282_13
Specimen euxassay_012282_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_14
Specimen euxassay_012282_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_15
Specimen euxassay_012282_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_012282_16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory