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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828308
Gene symbol: Slitrk6
Gene name: SLIT and NTRK-like family, member 6
Probe: T37057
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012161_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_01
TS23: dermis Weak Regionally restricted euxassay_012161_01
Specimen euxassay_012161_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_02
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_02
TS23: dermis Weak Regionally restricted euxassay_012161_02
Specimen euxassay_012161_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_03
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_03
TS23: vibrissa Moderate Regionally restricted euxassay_012161_03
TS23: utricle Strong Regionally restricted euxassay_012161_03
TS23: dermis Weak Regionally restricted euxassay_012161_03
TS23: left lung Moderate Regionally restricted euxassay_012161_03
Specimen euxassay_012161_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_04
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_04
TS23: vibrissa Moderate Regionally restricted euxassay_012161_04
TS23: utricle Strong Regionally restricted euxassay_012161_04
TS23: dermis Weak Regionally restricted euxassay_012161_04
TS23: left lung Moderate Regionally restricted euxassay_012161_04
Specimen euxassay_012161_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_05
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_05
TS23: vibrissa Moderate Regionally restricted euxassay_012161_05
TS23: utricle Strong Regionally restricted euxassay_012161_05
TS23: endolymphatic duct Strong Regionally restricted euxassay_012161_05
TS23: dermis Weak Regionally restricted euxassay_012161_05
TS23: left lung Weak Regionally restricted euxassay_012161_05
Specimen euxassay_012161_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_06
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_06
TS23: vibrissa Moderate Regionally restricted euxassay_012161_06
TS23: cochlea Strong Regionally restricted euxassay_012161_06
TS23: utricle Strong Regionally restricted euxassay_012161_06
TS23: dermis Weak Regionally restricted euxassay_012161_06
TS23: left lung Weak Regionally restricted euxassay_012161_06
Specimen euxassay_012161_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_07
TS23: cochlea Strong Regionally restricted euxassay_012161_07
TS23: dermis Weak Regionally restricted euxassay_012161_07
TS23: left lung Weak Regionally restricted euxassay_012161_07
Specimen euxassay_012161_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_08
TS23: dermis Weak Regionally restricted euxassay_012161_08
TS23: left lung Weak Regionally restricted euxassay_012161_08
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_08
Specimen euxassay_012161_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_012161_09
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_012161_09
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_09
TS23: dermis Weak Regionally restricted euxassay_012161_09
TS23: left lung Weak Regionally restricted euxassay_012161_09
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_09
Specimen euxassay_012161_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_10
TS23: esophagus Moderate Regionally restricted euxassay_012161_10
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_012161_10
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_10
TS23: dermis Weak Regionally restricted euxassay_012161_10
TS23: left lung Weak Regionally restricted euxassay_012161_10
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_10
Specimen euxassay_012161_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: esophagus Moderate Regionally restricted euxassay_012161_11
TS23: midgut Moderate Regionally restricted euxassay_012161_11
TS23: pharynx Moderate Regionally restricted euxassay_012161_11
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_012161_11
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_11
TS23: dermis Weak Regionally restricted euxassay_012161_11
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_11
Specimen euxassay_012161_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: esophagus Moderate Regionally restricted euxassay_012161_12
TS23: midgut Moderate Regionally restricted euxassay_012161_12
TS23: pharynx Moderate Regionally restricted euxassay_012161_12
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_012161_12
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_12
TS23: dermis Weak Regionally restricted euxassay_012161_12
TS23: right lung Weak Regionally restricted euxassay_012161_12
TS23: left lung Weak Regionally restricted euxassay_012161_12
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_12
Specimen euxassay_012161_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rectum Moderate Regionally restricted euxassay_012161_13
TS23: midgut Moderate Regionally restricted euxassay_012161_13
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_012161_13
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_13
TS23: dermis Weak Regionally restricted euxassay_012161_13
TS23: right lung Weak Regionally restricted euxassay_012161_13
Specimen euxassay_012161_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_14
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_012161_14
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_14
TS23: dermis Weak Regionally restricted euxassay_012161_14
TS23: right lung Weak Regionally restricted euxassay_012161_14
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_14
Specimen euxassay_012161_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_15
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_15
TS23: dermis Weak Regionally restricted euxassay_012161_15
TS23: right lung Weak Regionally restricted euxassay_012161_15
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_15
Specimen euxassay_012161_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_16
TS23: nasal cavity Moderate Regionally restricted euxassay_012161_16
TS23: cochlea Strong Regionally restricted euxassay_012161_16
TS23: dermis Weak Regionally restricted euxassay_012161_16
TS23: right lung Weak Regionally restricted euxassay_012161_16
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_16
Specimen euxassay_012161_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_17
TS23: vibrissa Moderate Regionally restricted euxassay_012161_17
TS23: utricle Strong Regionally restricted euxassay_012161_17
TS23: cochlea Strong Regionally restricted euxassay_012161_17
TS23: dermis Weak Regionally restricted euxassay_012161_17
TS23: right lung Weak Regionally restricted euxassay_012161_17
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012161_17
Specimen euxassay_012161_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_18
TS23: vibrissa Moderate Regionally restricted euxassay_012161_18
TS23: utricle Strong Regionally restricted euxassay_012161_18
TS23: dermis Weak Regionally restricted euxassay_012161_18
TS23: right lung Weak Regionally restricted euxassay_012161_18
Specimen euxassay_012161_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_19
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_19
TS23: vibrissa Moderate Regionally restricted euxassay_012161_19
TS23: utricle Strong Regionally restricted euxassay_012161_19
TS23: dermis Weak Regionally restricted euxassay_012161_19
TS23: right lung Weak Regionally restricted euxassay_012161_19
Specimen euxassay_012161_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_20
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_20
TS23: vibrissa Moderate Regionally restricted euxassay_012161_20
TS23: utricle Strong Regionally restricted euxassay_012161_20
TS23: dermis Weak Regionally restricted euxassay_012161_20
TS23: right lung Weak Regionally restricted euxassay_012161_20
Specimen euxassay_012161_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_21
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_21
TS23: vibrissa Moderate Regionally restricted euxassay_012161_21
TS23: dermis Weak Regionally restricted euxassay_012161_21
TS23: right lung Weak Regionally restricted euxassay_012161_21
Specimen euxassay_012161_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_22
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_22
TS23: vibrissa Moderate Regionally restricted euxassay_012161_22
Specimen euxassay_012161_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_23
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_23
TS23: vibrissa Moderate Regionally restricted euxassay_012161_23
Specimen euxassay_012161_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_012161_24
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_012161_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory