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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828233
Gene symbol: Slc44a1
Gene name: solute carrier family 44, member 1
Probe: T56050
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019727_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_01
TS23: fibula Moderate Regionally restricted euxassay_019727_01
TS23: liver Strong Spotted euxassay_019727_01
TS23: cornea Weak Regionally restricted euxassay_019727_01
Specimen euxassay_019727_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_02
TS23: rib Strong Regionally restricted euxassay_019727_02
TS23: tibia Moderate Regionally restricted euxassay_019727_02
TS23: fibula Moderate Regionally restricted euxassay_019727_02
TS23: liver Strong Spotted euxassay_019727_02
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_02
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_02
TS23: cornea Weak Regionally restricted euxassay_019727_02
Specimen euxassay_019727_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_03
TS23: rib Strong Regionally restricted euxassay_019727_03
TS23: tibia Moderate Regionally restricted euxassay_019727_03
TS23: fibula Moderate Regionally restricted euxassay_019727_03
TS23: liver Strong Spotted euxassay_019727_03
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_03
TS23: cornea Weak Regionally restricted euxassay_019727_03
TS23: lung Weak Regionally restricted euxassay_019727_03
Specimen euxassay_019727_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_019727_04
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_04
TS23: rib Strong Regionally restricted euxassay_019727_04
TS23: liver Strong Spotted euxassay_019727_04
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_04
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_04
TS23: cornea Weak Regionally restricted euxassay_019727_04
TS23: femur Weak Regionally restricted euxassay_019727_04
TS23: lung Weak Regionally restricted euxassay_019727_04
Specimen euxassay_019727_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_019727_05
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_05
TS23: rib Strong Regionally restricted euxassay_019727_05
TS23: testis Weak Regionally restricted euxassay_019727_05
TS23: liver Strong Spotted euxassay_019727_05
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_05
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_05
TS23: cornea Weak Regionally restricted euxassay_019727_05
TS23: femur Strong Regionally restricted euxassay_019727_05
TS23: lung Weak Regionally restricted euxassay_019727_05
Specimen euxassay_019727_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_019727_06
TS23: maxilla Strong Regionally restricted euxassay_019727_06
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_06
TS23: rib Strong Regionally restricted euxassay_019727_06
TS23: testis Weak Regionally restricted euxassay_019727_06
TS23: liver Strong Spotted euxassay_019727_06
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_06
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_06
TS23: femur Strong Regionally restricted euxassay_019727_06
TS23: lung Weak Regionally restricted euxassay_019727_06
Specimen euxassay_019727_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_07
TS23: mandible Strong Regionally restricted euxassay_019727_07
TS23: rib Strong Regionally restricted euxassay_019727_07
TS23: vibrissa Moderate Regionally restricted euxassay_019727_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_019727_07
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_019727_07
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_019727_07
TS23: testis Weak Regionally restricted euxassay_019727_07
TS23: liver Strong Spotted euxassay_019727_07
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_07
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_07
TS23: lung Weak Regionally restricted euxassay_019727_07
Specimen euxassay_019727_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_08
TS23: mandible Strong Regionally restricted euxassay_019727_08
TS23: vibrissa Moderate Regionally restricted euxassay_019727_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019727_08
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_019727_08
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_019727_08
TS23: hindlimb digit 5 phalanx Weak Regionally restricted euxassay_019727_08
TS23: hindlimb digit 4 phalanx Weak Regionally restricted euxassay_019727_08
TS23: liver Strong Spotted euxassay_019727_08
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_08
TS23: lung Weak Regionally restricted euxassay_019727_08
Specimen euxassay_019727_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_09
TS23: mandible Strong Regionally restricted euxassay_019727_09
TS23: vibrissa Moderate Regionally restricted euxassay_019727_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019727_09
TS23: pancreas Moderate Regionally restricted euxassay_019727_09
TS23: clavicle Moderate Regionally restricted euxassay_019727_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019727_09
TS23: liver Strong Spotted euxassay_019727_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019727_09
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_09
TS23: lung Weak Regionally restricted euxassay_019727_09
Specimen euxassay_019727_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_10
TS23: mandible Strong Regionally restricted euxassay_019727_10
TS23: midgut Strong Regionally restricted euxassay_019727_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019727_10
TS23: pancreas Moderate Regionally restricted euxassay_019727_10
TS23: clavicle Moderate Regionally restricted euxassay_019727_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019727_10
TS23: liver Strong Spotted euxassay_019727_10
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_10
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_10
TS23: lung Weak Regionally restricted euxassay_019727_10
Specimen euxassay_019727_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_11
TS23: mandible Strong Regionally restricted euxassay_019727_11
TS23: midgut Strong Regionally restricted euxassay_019727_11
TS23: pancreas Moderate Regionally restricted euxassay_019727_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019727_11
TS23: liver Strong Spotted euxassay_019727_11
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_11
TS23: lung Weak Regionally restricted euxassay_019727_11
TS23: pituitary gland Weak Regionally restricted euxassay_019727_11
Specimen euxassay_019727_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_12
TS23: mandible Strong Regionally restricted euxassay_019727_12
TS23: midgut Strong Regionally restricted euxassay_019727_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_019727_12
TS23: liver Strong Spotted euxassay_019727_12
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019727_12
TS23: palatal shelf Weak Regionally restricted euxassay_019727_12
TS23: thymus primordium Weak Regionally restricted euxassay_019727_12
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_019727_12
Specimen euxassay_019727_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_13
TS23: mandible Strong Regionally restricted euxassay_019727_13
TS23: midgut Strong Regionally restricted euxassay_019727_13
TS23: urethra Weak Regionally restricted euxassay_019727_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: bladder Moderate Regionally restricted euxassay_019727_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_019727_13
TS23: esophagus Moderate Regionally restricted euxassay_019727_13
TS23: liver Strong Spotted euxassay_019727_13
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019727_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019727_13
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_13
TS23: palatal shelf Weak Regionally restricted euxassay_019727_13
TS23: thymus primordium Weak Regionally restricted euxassay_019727_13
TS23: pituitary gland Weak Regionally restricted euxassay_019727_13
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_019727_13
Specimen euxassay_019727_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_019727_14
TS23: hindgut Strong Regionally restricted euxassay_019727_14
TS23: urethra Weak Regionally restricted euxassay_019727_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: bladder Moderate Regionally restricted euxassay_019727_14
TS23: sternum Moderate Regionally restricted euxassay_019727_14
TS23: liver Strong Spotted euxassay_019727_14
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019727_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019727_14
TS23: lung Weak Regionally restricted euxassay_019727_14
TS23: thymus primordium Weak Regionally restricted euxassay_019727_14
TS23: pituitary gland Weak Regionally restricted euxassay_019727_14
Specimen euxassay_019727_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_019727_15
TS23: hindgut Strong Regionally restricted euxassay_019727_15
TS23: urethra Weak Regionally restricted euxassay_019727_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: bladder Moderate Regionally restricted euxassay_019727_15
TS23: sternum Moderate Regionally restricted euxassay_019727_15
TS23: liver Strong Spotted euxassay_019727_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019727_15
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_019727_15
TS23: palatal shelf Weak Regionally restricted euxassay_019727_15
TS23: lung Weak Regionally restricted euxassay_019727_15
TS23: thymus primordium Moderate Regionally restricted euxassay_019727_15
TS23: pituitary gland Weak Regionally restricted euxassay_019727_15
Specimen euxassay_019727_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_16
TS23: mandible Strong Regionally restricted euxassay_019727_16
TS23: midgut Strong Regionally restricted euxassay_019727_16
TS23: hindgut Strong Regionally restricted euxassay_019727_16
TS23: pancreas Weak Regionally restricted euxassay_019727_16
TS23: urethra Moderate Regionally restricted euxassay_019727_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: liver Strong Spotted euxassay_019727_16
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_16
TS23: palatal shelf Weak Regionally restricted euxassay_019727_16
TS23: lung Weak Regionally restricted euxassay_019727_16
TS23: pituitary gland Weak Regionally restricted euxassay_019727_16
Specimen euxassay_019727_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_17
TS23: mandible Strong Regionally restricted euxassay_019727_17
TS23: hindgut Strong Regionally restricted euxassay_019727_17
TS23: midgut Strong Regionally restricted euxassay_019727_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019727_17
TS23: pancreas Weak Regionally restricted euxassay_019727_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_019727_17
TS23: liver Strong Spotted euxassay_019727_17
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_17
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_17
TS23: palatal shelf Weak Regionally restricted euxassay_019727_17
TS23: lung Weak Regionally restricted euxassay_019727_17
Specimen euxassay_019727_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_18
TS23: mandible Strong Regionally restricted euxassay_019727_18
TS23: midgut Strong Regionally restricted euxassay_019727_18
TS23: hindgut Strong Regionally restricted euxassay_019727_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019727_18
TS23: pancreas Weak Regionally restricted euxassay_019727_18
TS23: clavicle Moderate Regionally restricted euxassay_019727_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019727_18
TS23: liver Strong Spotted euxassay_019727_18
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_18
TS23: lung Weak Regionally restricted euxassay_019727_18
Specimen euxassay_019727_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_19
TS23: mandible Strong Regionally restricted euxassay_019727_19
TS23: midgut Strong Regionally restricted euxassay_019727_19
TS23: hindgut Strong Regionally restricted euxassay_019727_19
TS23: rib Strong Regionally restricted euxassay_019727_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019727_19
TS23: clavicle Moderate Regionally restricted euxassay_019727_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019727_19
TS23: liver Strong Spotted euxassay_019727_19
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_19
TS23: lung Weak Regionally restricted euxassay_019727_19
Specimen euxassay_019727_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_20
TS23: mandible Strong Regionally restricted euxassay_019727_20
TS23: midgut Strong Regionally restricted euxassay_019727_20
TS23: rib Moderate Regionally restricted euxassay_019727_20
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019727_20
TS23: olfactory epithelium Weak Regionally restricted euxassay_019727_20
TS23: testis Weak Regionally restricted euxassay_019727_20
TS23: liver Strong Spotted euxassay_019727_20
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_20
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_20
TS23: lung Weak Regionally restricted euxassay_019727_20
Specimen euxassay_019727_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_21
TS23: mandible Strong Regionally restricted euxassay_019727_21
TS23: midgut Strong Regionally restricted euxassay_019727_21
TS23: rib Strong Regionally restricted euxassay_019727_21
TS23: vibrissa Moderate Regionally restricted euxassay_019727_21
TS23: testis Weak Regionally restricted euxassay_019727_21
TS23: liver Strong Spotted euxassay_019727_21
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_21
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_21
TS23: lung Weak Regionally restricted euxassay_019727_21
Specimen euxassay_019727_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_019727_22
TS23: mandible Strong Regionally restricted euxassay_019727_22
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_22
TS23: rib Strong Regionally restricted euxassay_019727_22
TS23: vibrissa Moderate Regionally restricted euxassay_019727_22
TS23: hindlimb digit 5 phalanx Weak Regionally restricted euxassay_019727_22
TS23: hindlimb digit 4 phalanx Weak Regionally restricted euxassay_019727_22
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_019727_22
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_019727_22
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_019727_22
TS23: liver Strong Spotted euxassay_019727_22
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019727_22
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019727_22
TS23: cornea Weak Regionally restricted euxassay_019727_22
TS23: femur Strong Regionally restricted euxassay_019727_22
TS23: lung Weak Regionally restricted euxassay_019727_22
Specimen euxassay_019727_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019727_23
TS23: rib Strong Regionally restricted euxassay_019727_23
TS23: liver Strong Spotted euxassay_019727_23
TS23: cornea Weak Regionally restricted euxassay_019727_23
TS23: femur Moderate Regionally restricted euxassay_019727_23
TS23: lung Weak Regionally restricted euxassay_019727_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory