About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828078
Gene symbol: Sirpa
Gene name: signal-regulatory protein alpha
Probe: T31964
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013621_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_01
TS23: embryo Moderate Spotted euxassay_013621_01
Specimen euxassay_013621_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_02
TS23: embryo Moderate Spotted euxassay_013621_02
Specimen euxassay_013621_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_03
TS23: embryo Moderate Spotted euxassay_013621_03
Specimen euxassay_013621_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_04
TS23: embryo Moderate Spotted euxassay_013621_04
Specimen euxassay_013621_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_05
TS23: embryo Moderate Spotted euxassay_013621_05
Specimen euxassay_013621_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_06
TS23: embryo Moderate Spotted euxassay_013621_06
Specimen euxassay_013621_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_07
TS23: embryo Moderate Spotted euxassay_013621_07
Specimen euxassay_013621_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_08
TS23: embryo Moderate Spotted euxassay_013621_08
Specimen euxassay_013621_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013621_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_09
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_013621_09
TS23: embryo Moderate Spotted euxassay_013621_09
Specimen euxassay_013621_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_013621_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_10
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013621_10
TS23: embryo Moderate Spotted euxassay_013621_10
Specimen euxassay_013621_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata floor plate Strong Regionally restricted euxassay_013621_11
TS23: metencephalon floor plate Strong Regionally restricted euxassay_013621_11
TS23: midbrain floor plate Strong Regionally restricted euxassay_013621_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_11
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_013621_11
TS23: embryo Moderate Spotted euxassay_013621_11
Specimen euxassay_013621_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain floor plate Strong Regionally restricted euxassay_013621_12
TS23: spinal cord floor plate Strong Regionally restricted euxassay_013621_12
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_013621_12
TS23: embryo Moderate Spotted euxassay_013621_12
Specimen euxassay_013621_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord floor plate Strong Regionally restricted euxassay_013621_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_13
TS23: embryo Moderate Spotted euxassay_013621_13
Specimen euxassay_013621_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013621_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013621_14
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_013621_14
TS23: embryo Moderate Spotted euxassay_013621_14
Specimen euxassay_013621_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_013621_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013621_15
TS23: embryo Moderate Spotted euxassay_013621_15
Specimen euxassay_013621_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_013621_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013621_16
TS23: embryo Moderate Spotted euxassay_013621_16
Specimen euxassay_013621_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo Moderate Spotted euxassay_013621_17
Specimen euxassay_013621_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_18
TS23: embryo Moderate Spotted euxassay_013621_18
Specimen euxassay_013621_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_19
TS23: embryo Moderate Spotted euxassay_013621_19
Specimen euxassay_013621_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_20
TS23: embryo Moderate Spotted euxassay_013621_20
Specimen euxassay_013621_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_21
TS23: embryo Moderate Spotted euxassay_013621_21
Specimen euxassay_013621_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_22
TS23: embryo Moderate Spotted euxassay_013621_22
Specimen euxassay_013621_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013621_23
TS23: embryo Moderate Spotted euxassay_013621_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory