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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828054
Gene symbol: Shf
Gene name: Src homology 2 domain containing F
Probe: MGC clone 30399
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001116_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_03
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_03
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_03
Specimen euxassay_001116_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_04
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_04
Specimen euxassay_001116_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_05
TS23: facial ganglion Weak Uniform euxassay_001116_05
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_05
Specimen euxassay_001116_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Weak Uniform euxassay_001116_06
TS23: trigeminal ganglion Weak Uniform euxassay_001116_06
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_001116_06
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_06
Specimen euxassay_001116_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Weak Uniform euxassay_001116_07
TS23: trigeminal ganglion Weak Uniform euxassay_001116_07
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_001116_07
TS23: glossopharyngeal ganglion Weak Uniform euxassay_001116_07
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_07
TS23: medulla oblongata basal plate Weak Uniform euxassay_001116_07 trigeminal motor nucleus
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_07
Specimen euxassay_001116_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_001116_08
TS23: trigeminal ganglion Weak Uniform euxassay_001116_08
TS23: glossopharyngeal ganglion Weak Uniform euxassay_001116_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_08
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_08
TS23: medulla oblongata basal plate Weak Uniform euxassay_001116_08 facial motor nucleus
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_08
Specimen euxassay_001116_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Uniform euxassay_001116_09
TS23: trigeminal ganglion Weak Uniform euxassay_001116_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_09
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_09
TS23: medulla oblongata basal plate Weak Uniform euxassay_001116_09 facial motor nucleus
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_09
Specimen euxassay_001116_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Uniform euxassay_001116_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_10
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_10
TS23: medulla oblongata basal plate Weak Uniform euxassay_001116_10 facial motor nucleus
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001116_10
Specimen euxassay_001116_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_11
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_11
Specimen euxassay_001116_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_12
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001116_12
Specimen euxassay_001116_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001116_13
Specimen euxassay_001116_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001116_14
Specimen euxassay_001116_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_15
Specimen euxassay_001116_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_16
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_16
TS23: medulla oblongata basal plate Moderate Uniform euxassay_001116_16 facial motor nucleus
Specimen euxassay_001116_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Uniform euxassay_001116_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_17
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_17
TS23: medulla oblongata basal plate Moderate Uniform euxassay_001116_17 trigeminal motor nucleus and facial motor nucleus
Specimen euxassay_001116_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Uniform euxassay_001116_18
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_001116_18
TS23: trigeminal ganglion Weak Uniform euxassay_001116_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_18
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_18
Specimen euxassay_001116_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Uniform euxassay_001116_19
TS23: trigeminal ganglion Weak Uniform euxassay_001116_19
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_001116_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001116_19
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_19
Specimen euxassay_001116_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_20
TS23: facial ganglion Weak Uniform euxassay_001116_20
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_20
Specimen euxassay_001116_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_21
TS23: facial ganglion Weak Uniform euxassay_001116_21
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_21
Specimen euxassay_001116_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_22
TS23: facial ganglion Weak Uniform euxassay_001116_22
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_22
Specimen euxassay_001116_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001116_23
TS23: cerebral cortex Weak Regionally restricted euxassay_001116_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory