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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827982
Gene symbol: Serpina3n
Gene name: serine (or cysteine) peptidase inhibitor, clade A, member 3N
Probe: IMAGE clone 1888347
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006232_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_01
Specimen euxassay_006232_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_02
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_02
Specimen euxassay_006232_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_03
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_006232_03
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_03
Specimen euxassay_006232_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_04
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_04
Specimen euxassay_006232_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_05
TS23: pons mantle layer Strong Regionally restricted euxassay_006232_05 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006232_05 facial motor nucleus
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_05
Specimen euxassay_006232_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_06
TS23: thymus primordium Strong Regionally restricted euxassay_006232_06
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006232_06 dorsal motor nucleus
Specimen euxassay_006232_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_006232_07
TS23: thymus primordium Strong Regionally restricted euxassay_006232_07
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006232_07 dorsal motor nucleus
Specimen euxassay_006232_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_006232_08
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006232_08 dorsal motor nucleus
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_08
Specimen euxassay_006232_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_006232_09
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_09
Specimen euxassay_006232_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_10
TS23: axial skeleton tail region Strong Regionally restricted euxassay_006232_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_10
Specimen euxassay_006232_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006232_11 facial motor nucleus
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_11
TS23: axial skeleton tail region Strong Regionally restricted euxassay_006232_11
TS23: nasal septum Moderate Regionally restricted euxassay_006232_11
Specimen euxassay_006232_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006232_12 facial motor nucleus
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_12
TS23: axial skeleton tail region Strong Regionally restricted euxassay_006232_12
TS23: nasal septum Moderate Regionally restricted euxassay_006232_12
Specimen euxassay_006232_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_006232_13
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_13
TS23: nasal septum Moderate Regionally restricted euxassay_006232_13
Specimen euxassay_006232_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_006232_14 trigeminal motor nucleus
TS23: dorsal root ganglion Moderate Single cells euxassay_006232_14
TS23: nasal septum Moderate Regionally restricted euxassay_006232_14
Specimen euxassay_006232_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_15
TS23: nasal septum Moderate Regionally restricted euxassay_006232_15
Specimen euxassay_006232_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_16
TS23: nasal septum Moderate Regionally restricted euxassay_006232_16
Specimen euxassay_006232_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_17
TS23: nasal septum Moderate Regionally restricted euxassay_006232_17
Specimen euxassay_006232_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_18
Specimen euxassay_006232_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006232_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_19
Specimen euxassay_006232_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_006232_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory