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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827564
Gene symbol: Rab11fip4
Gene name: RAB11 family interacting protein 4 (class II)
Probe: T36932
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009634_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basisphenoid bone Moderate Regionally restricted euxassay_009634_01
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_01
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_01
TS23: tibia Moderate Regionally restricted euxassay_009634_01
TS23: femur Moderate Regionally restricted euxassay_009634_01
TS23: radius Weak Regionally restricted euxassay_009634_01
TS23: forebrain Moderate Regionally restricted euxassay_009634_01
Specimen euxassay_009634_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_02
TS23: basisphenoid bone Moderate Regionally restricted euxassay_009634_02
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_02
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_02
TS23: femur Moderate Regionally restricted euxassay_009634_02
TS23: fibula Moderate Regionally restricted euxassay_009634_02
TS23: tibia Moderate Regionally restricted euxassay_009634_02
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_009634_02
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_009634_02
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_009634_02
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_009634_02
TS23: humerus Weak Regionally restricted euxassay_009634_02
TS23: forebrain Weak Regionally restricted euxassay_009634_02
TS23: neural retina Weak Regionally restricted euxassay_009634_02
Specimen euxassay_009634_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_03
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_03
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_03
TS23: tarsus Moderate Regionally restricted euxassay_009634_03
TS23: femur Moderate Regionally restricted euxassay_009634_03
TS23: scapula Weak Regionally restricted euxassay_009634_03
TS23: humerus Weak Regionally restricted euxassay_009634_03
TS23: hindbrain Weak Regionally restricted euxassay_009634_03
TS23: forebrain Weak Regionally restricted euxassay_009634_03
TS23: neural retina Weak Regionally restricted euxassay_009634_03
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_03
Specimen euxassay_009634_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_04
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_04
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_04
TS23: femur Moderate Regionally restricted euxassay_009634_04
TS23: scapula Moderate Regionally restricted euxassay_009634_04
TS23: humerus Moderate Regionally restricted euxassay_009634_04
TS23: forebrain Weak Regionally restricted euxassay_009634_04
TS23: hindbrain Weak Regionally restricted euxassay_009634_04
TS23: facial ganglion Weak Regionally restricted euxassay_009634_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_04
Specimen euxassay_009634_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_05
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_05
TS23: temporal bone petrous part Strong Regionally restricted euxassay_009634_05
TS23: exoccipital bone Strong Regionally restricted euxassay_009634_05
TS23: scapula Weak Regionally restricted euxassay_009634_05
TS23: humerus Moderate Regionally restricted euxassay_009634_05
TS23: mandible Weak Regionally restricted euxassay_009634_05
TS23: midbrain Moderate Regionally restricted euxassay_009634_05
TS23: hindbrain Moderate Regionally restricted euxassay_009634_05
TS23: forebrain Moderate Regionally restricted euxassay_009634_05
TS23: facial ganglion Weak Regionally restricted euxassay_009634_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_05
Specimen euxassay_009634_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_06
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_06
TS23: femur Weak Regionally restricted euxassay_009634_06
TS23: mandible Weak Regionally restricted euxassay_009634_06
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_06
TS23: midbrain Moderate Regionally restricted euxassay_009634_06
TS23: hindbrain Moderate Regionally restricted euxassay_009634_06
TS23: forebrain Moderate Regionally restricted euxassay_009634_06
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_009634_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_06
Specimen euxassay_009634_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_07
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_07
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_07
TS23: femur Moderate Regionally restricted euxassay_009634_07
TS23: mandible Weak Regionally restricted euxassay_009634_07
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_07
TS23: clavicle Weak Regionally restricted euxassay_009634_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_07
TS23: otic capsule Moderate Regionally restricted euxassay_009634_07
TS23: midbrain Weak Regionally restricted euxassay_009634_07
TS23: hindbrain Weak Regionally restricted euxassay_009634_07
TS23: forebrain Weak Regionally restricted euxassay_009634_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_009634_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_07
Specimen euxassay_009634_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_08
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_08
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_08
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_08
TS23: mandible Weak Regionally restricted euxassay_009634_08
TS23: axial skeleton Weak Regionally restricted euxassay_009634_08
TS23: clavicle Weak Regionally restricted euxassay_009634_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_08
TS23: otic capsule Moderate Regionally restricted euxassay_009634_08
TS23: hindbrain Weak Regionally restricted euxassay_009634_08
TS23: midbrain Weak Regionally restricted euxassay_009634_08
TS23: forebrain Weak Regionally restricted euxassay_009634_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_08
TS23: vagus ganglion Weak Regionally restricted euxassay_009634_08
Specimen euxassay_009634_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_09
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_09
TS23: mandible Weak Regionally restricted euxassay_009634_09
TS23: axial skeleton Weak Regionally restricted euxassay_009634_09
TS23: clavicle Moderate Regionally restricted euxassay_009634_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_09
TS23: otic capsule Moderate Regionally restricted euxassay_009634_09
TS23: spinal cord Moderate Regionally restricted euxassay_009634_09
TS23: midbrain Moderate Regionally restricted euxassay_009634_09
TS23: hindbrain Moderate Regionally restricted euxassay_009634_09
TS23: forebrain Moderate Regionally restricted euxassay_009634_09
Specimen euxassay_009634_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_10
TS23: hip Moderate Regionally restricted euxassay_009634_10
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_10
TS23: mandible Weak Regionally restricted euxassay_009634_10
TS23: axial skeleton Weak Regionally restricted euxassay_009634_10
TS23: clavicle Moderate Regionally restricted euxassay_009634_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_10
TS23: cricoid cartilage Weak Regionally restricted euxassay_009634_10
TS23: spinal cord Moderate Regionally restricted euxassay_009634_10
TS23: hindbrain Moderate Regionally restricted euxassay_009634_10
TS23: midbrain Moderate Regionally restricted euxassay_009634_10
TS23: forebrain Moderate Regionally restricted euxassay_009634_10
Specimen euxassay_009634_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_11
TS23: mandible Weak Regionally restricted euxassay_009634_11
TS23: axial skeleton Weak Regionally restricted euxassay_009634_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_11
TS23: nasal septum Moderate Regionally restricted euxassay_009634_11
TS23: thymus primordium Strong Regionally restricted euxassay_009634_11
TS23: thyroid cartilage Weak Regionally restricted euxassay_009634_11
TS23: spinal cord Moderate Regionally restricted euxassay_009634_11
TS23: midbrain Moderate Regionally restricted euxassay_009634_11
TS23: hindbrain Moderate Regionally restricted euxassay_009634_11
TS23: forebrain Moderate Regionally restricted euxassay_009634_11
Specimen euxassay_009634_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_12
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_12
TS23: basisphenoid bone Moderate Regionally restricted euxassay_009634_12
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_12
TS23: axial skeleton Weak Regionally restricted euxassay_009634_12
TS23: nasal septum Moderate Regionally restricted euxassay_009634_12
TS23: thymus primordium Strong Regionally restricted euxassay_009634_12
TS23: thyroid cartilage Weak Regionally restricted euxassay_009634_12
TS23: spinal cord Moderate Regionally restricted euxassay_009634_12
TS23: midbrain Moderate Regionally restricted euxassay_009634_12
TS23: hindbrain Moderate Regionally restricted euxassay_009634_12
TS23: forebrain Moderate Regionally restricted euxassay_009634_12
Specimen euxassay_009634_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basisphenoid bone Moderate Regionally restricted euxassay_009634_13
TS23: Meckel's cartilage Strong Regionally restricted euxassay_009634_13
TS23: axial skeleton tail region Weak Regionally restricted euxassay_009634_13
TS23: axial skeleton Weak Regionally restricted euxassay_009634_13
TS23: nasal septum Strong Regionally restricted euxassay_009634_13
TS23: thymus primordium Moderate Regionally restricted euxassay_009634_13
TS23: thyroid cartilage Weak Regionally restricted euxassay_009634_13
TS23: spinal cord Moderate Regionally restricted euxassay_009634_13
TS23: midbrain Moderate Regionally restricted euxassay_009634_13
TS23: hindbrain Moderate Regionally restricted euxassay_009634_13
TS23: forebrain Moderate Regionally restricted euxassay_009634_13
Specimen euxassay_009634_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basisphenoid bone Strong Regionally restricted euxassay_009634_14
TS23: Meckel's cartilage Strong Regionally restricted euxassay_009634_14
TS23: axial skeleton Weak Regionally restricted euxassay_009634_14
TS23: axial skeleton tail region Weak Regionally restricted euxassay_009634_14
TS23: nasal septum Strong Regionally restricted euxassay_009634_14
TS23: thymus primordium Moderate Regionally restricted euxassay_009634_14
TS23: thyroid cartilage Weak Regionally restricted euxassay_009634_14
TS23: midbrain Moderate Regionally restricted euxassay_009634_14
TS23: hindbrain Moderate Regionally restricted euxassay_009634_14
TS23: forebrain Moderate Regionally restricted euxassay_009634_14
TS23: spinal cord Moderate Regionally restricted euxassay_009634_14
Specimen euxassay_009634_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_15
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_15
TS23: mandible Weak Regionally restricted euxassay_009634_15
TS23: axial skeleton Weak Regionally restricted euxassay_009634_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_15
TS23: nasal septum Strong Regionally restricted euxassay_009634_15
TS23: thymus primordium Strong Regionally restricted euxassay_009634_15
TS23: cricoid cartilage Weak Regionally restricted euxassay_009634_15
TS23: spinal cord Moderate Regionally restricted euxassay_009634_15
TS23: hindbrain Moderate Regionally restricted euxassay_009634_15
TS23: forebrain Moderate Regionally restricted euxassay_009634_15
TS23: midbrain Moderate Regionally restricted euxassay_009634_15
Specimen euxassay_009634_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_16
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_16
TS23: mandible Weak Regionally restricted euxassay_009634_16
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_16
TS23: axial skeleton Weak Regionally restricted euxassay_009634_16
TS23: clavicle Moderate Regionally restricted euxassay_009634_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_16
TS23: otic capsule Moderate Regionally restricted euxassay_009634_16
TS23: midbrain Weak Regionally restricted euxassay_009634_16
TS23: hindbrain Weak Regionally restricted euxassay_009634_16
TS23: forebrain Weak Regionally restricted euxassay_009634_16
Specimen euxassay_009634_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_17
TS23: hip Moderate Regionally restricted euxassay_009634_17
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_17
TS23: mandible Weak Regionally restricted euxassay_009634_17
TS23: axial skeleton Weak Regionally restricted euxassay_009634_17
TS23: clavicle Weak Regionally restricted euxassay_009634_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_009634_17
TS23: otic capsule Moderate Regionally restricted euxassay_009634_17
TS23: midbrain Moderate Regionally restricted euxassay_009634_17
TS23: hindbrain Moderate Regionally restricted euxassay_009634_17
TS23: forebrain Moderate Regionally restricted euxassay_009634_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_17
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_009634_17
TS23: vagus ganglion Weak Regionally restricted euxassay_009634_17
Specimen euxassay_009634_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_18
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_18
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_18
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_18
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_18
TS23: mandible Weak Regionally restricted euxassay_009634_18
TS23: axial skeleton Weak Regionally restricted euxassay_009634_18
TS23: clavicle Weak Regionally restricted euxassay_009634_18
TS23: otic capsule Moderate Regionally restricted euxassay_009634_18
TS23: midbrain Moderate Regionally restricted euxassay_009634_18
TS23: hindbrain Moderate Regionally restricted euxassay_009634_18
TS23: forebrain Moderate Regionally restricted euxassay_009634_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_009634_18
Specimen euxassay_009634_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_19
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009634_19
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_19
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_19
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_19
TS23: femur Moderate Regionally restricted euxassay_009634_19
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_19
TS23: mandible Weak Regionally restricted euxassay_009634_19
TS23: hindbrain Moderate Regionally restricted euxassay_009634_19
TS23: forebrain Moderate Regionally restricted euxassay_009634_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_19
TS23: facial ganglion Weak Regionally restricted euxassay_009634_19
Specimen euxassay_009634_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_20
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_20
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_20
TS23: orbito-sphenoid Strong Regionally restricted euxassay_009634_20
TS23: femur Moderate Regionally restricted euxassay_009634_20
TS23: Meckel's cartilage Weak Regionally restricted euxassay_009634_20
TS23: mandible Weak Regionally restricted euxassay_009634_20
TS23: forebrain Moderate Regionally restricted euxassay_009634_20
TS23: hindbrain Moderate Regionally restricted euxassay_009634_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_20
TS23: facial ganglion Weak Regionally restricted euxassay_009634_20
Specimen euxassay_009634_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_21
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_21
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_21
TS23: femur Weak Regionally restricted euxassay_009634_21
TS23: humerus Moderate Regionally restricted euxassay_009634_21
TS23: scapula Weak Regionally restricted euxassay_009634_21
TS23: mandible Weak Regionally restricted euxassay_009634_21
TS23: forebrain Weak Regionally restricted euxassay_009634_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_21
TS23: facial ganglion Weak Regionally restricted euxassay_009634_21
Specimen euxassay_009634_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_22
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_22
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_22
TS23: femur Weak Regionally restricted euxassay_009634_22
TS23: humerus Moderate Regionally restricted euxassay_009634_22
TS23: scapula Weak Regionally restricted euxassay_009634_22
TS23: forebrain Weak Regionally restricted euxassay_009634_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009634_22
Specimen euxassay_009634_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_23
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_23
TS23: basisphenoid bone Moderate Regionally restricted euxassay_009634_23
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_23
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_23
TS23: femur Weak Regionally restricted euxassay_009634_23
TS23: humerus Moderate Regionally restricted euxassay_009634_23
TS23: scapula Weak Regionally restricted euxassay_009634_23
TS23: forebrain Weak Regionally restricted euxassay_009634_23
TS23: neural retina Weak Regionally restricted euxassay_009634_23
Specimen euxassay_009634_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_009634_24
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009634_24
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_009634_24
TS23: basisphenoid bone Moderate Regionally restricted euxassay_009634_24
TS23: exoccipital bone Moderate Regionally restricted euxassay_009634_24
TS23: femur Moderate Regionally restricted euxassay_009634_24
TS23: forebrain Moderate Regionally restricted euxassay_009634_24
TS23: neural retina Weak Regionally restricted euxassay_009634_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory