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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827467
Gene symbol: Psen1
Gene name: presenilin 1
Probe: T31703
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011643_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011643_01
TS23: neural retina Weak Regionally restricted euxassay_011643_01
Specimen euxassay_011643_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011643_02
TS23: neural retina Weak Regionally restricted euxassay_011643_02
Specimen euxassay_011643_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011643_03
TS23: neural retina Weak Regionally restricted euxassay_011643_03
Specimen euxassay_011643_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011643_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_04
TS23: facial ganglion Weak Regionally restricted euxassay_011643_04
TS23: neural retina Weak Regionally restricted euxassay_011643_04
Specimen euxassay_011643_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011643_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_05
TS23: facial ganglion Weak Regionally restricted euxassay_011643_05
Specimen euxassay_011643_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_06
TS23: facial ganglion Weak Regionally restricted euxassay_011643_06
Specimen euxassay_011643_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011643_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011643_07
TS23: pons mantle layer Weak Regionally restricted euxassay_011643_07 trigeminal motor nucleus
TS23: midgut Weak Regionally restricted euxassay_011643_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_07
Specimen euxassay_011643_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011643_08
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011643_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_08
TS23: midgut Weak Regionally restricted euxassay_011643_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_08
Specimen euxassay_011643_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Regionally restricted euxassay_011643_09
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011643_09 facial motor nucleus
TS23: midgut Weak Regionally restricted euxassay_011643_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_09
Specimen euxassay_011643_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Weak Regionally restricted euxassay_011643_10
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011643_10 facial motor nucleus
TS23: midgut Weak Regionally restricted euxassay_011643_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_10
Specimen euxassay_011643_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_011643_11
Specimen euxassay_011643_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_011643_12
Specimen euxassay_011643_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_011643_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_13
Specimen euxassay_011643_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_011643_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_14
Specimen euxassay_011643_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_011643_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_15
TS23: bladder Weak Regionally restricted euxassay_011643_15
Specimen euxassay_011643_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011643_16 facial motor nucleus
TS23: midgut Weak Regionally restricted euxassay_011643_16
TS23: hindgut Weak Regionally restricted euxassay_011643_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_16
TS23: urethra Weak Regionally restricted euxassay_011643_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder Weak Regionally restricted euxassay_011643_16
Specimen euxassay_011643_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Weak Regionally restricted euxassay_011643_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011643_17 facial motor nucleus
TS23: midgut Weak Regionally restricted euxassay_011643_17
TS23: rectum Weak Regionally restricted euxassay_011643_17
TS23: hindgut Weak Regionally restricted euxassay_011643_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_17
TS23: urethra Weak Regionally restricted euxassay_011643_17 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_011643_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Weak Regionally restricted euxassay_011643_18
TS23: vagus ganglion Weak Regionally restricted euxassay_011643_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011643_18
TS23: pons mantle layer Weak Regionally restricted euxassay_011643_18 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011643_18 facial motor nucleus
TS23: midgut Weak Regionally restricted euxassay_011643_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_18
Specimen euxassay_011643_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_19
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011643_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011643_19
TS23: midgut Weak Regionally restricted euxassay_011643_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_19
Specimen euxassay_011643_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_20
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011643_20
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011643_20
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_20
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_20
Specimen euxassay_011643_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_21
TS23: facial ganglion Weak Regionally restricted euxassay_011643_21
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011643_21
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011643_21
Specimen euxassay_011643_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_22
TS23: facial ganglion Weak Regionally restricted euxassay_011643_22
Specimen euxassay_011643_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011643_23
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011643_23
TS23: facial ganglion Weak Regionally restricted euxassay_011643_23
TS23: neural retina Weak Regionally restricted euxassay_011643_23
Specimen euxassay_011643_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011643_24
TS23: neural retina Weak Regionally restricted euxassay_011643_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory