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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827172
Gene symbol: Pgk1
Gene name: phosphoglycerate kinase 1
Probe: IMAGE clone 2537127
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. The probe used in this assay may also recognize other genes.
Results
Specimen euxassay_000011_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_000011_01
Specimen euxassay_000011_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000011_02
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_02
Specimen euxassay_000011_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_03
TS23: vertebral axis musculature Strong Regionally restricted euxassay_000011_03
Specimen euxassay_000011_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_000011_04
TS23: trigeminal ganglion Strong Uniform euxassay_000011_04
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000011_04
TS23: diaphragm Strong Regionally restricted euxassay_000011_04
Specimen euxassay_000011_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000011_05
TS23: vertebral axis musculature Moderate Uniform euxassay_000011_05
Specimen euxassay_000011_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_06
TS23: diaphragm Strong Regionally restricted euxassay_000011_06
TS23: vibrissa Moderate Regionally restricted euxassay_000011_06
TS23: vertebral axis musculature Strong Regionally restricted euxassay_000011_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000011_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_000011_06
TS23: nasal cavity Moderate Regionally restricted euxassay_000011_06
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000011_06
Specimen euxassay_000011_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_000011_07
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_07
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000011_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000011_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_000011_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_000011_07
TS23: lung Moderate Spotted euxassay_000011_07
Specimen euxassay_000011_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Spotted euxassay_000011_08
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_08
TS23: vibrissa Moderate Regionally restricted euxassay_000011_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000011_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000011_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000011_08
TS23: mandible Moderate Regionally restricted euxassay_000011_08
Specimen euxassay_000011_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000011_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000011_10
TS23: stomach Strong Regionally restricted euxassay_000011_10
TS23: vibrissa Moderate Regionally restricted euxassay_000011_10
TS23: mandible Moderate Regionally restricted euxassay_000011_10
TS23: lung Moderate Spotted euxassay_000011_10
Specimen euxassay_000011_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_000011_11
TS23: urinary system Moderate Regionally restricted euxassay_000011_11
TS23: metanephros Moderate Regionally restricted euxassay_000011_11
TS23: vibrissa Strong Regionally restricted euxassay_000011_11
TS23: cerebral cortex Moderate Regionally restricted euxassay_000011_11
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000011_11
TS23: salivary gland Strong Uniform euxassay_000011_11
TS23: submandibular gland primordium Strong Uniform euxassay_000011_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000011_11
TS23: heart Strong Regionally restricted euxassay_000011_11
Specimen euxassay_000011_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000011_12
TS23: facial ganglion Strong Regionally restricted euxassay_000011_12
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_12
TS23: cerebral cortex Strong Regionally restricted euxassay_000011_12
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000011_12
TS23: mandible Moderate Regionally restricted euxassay_000011_12
TS23: lung Moderate Spotted euxassay_000011_12
TS23: heart Strong Regionally restricted euxassay_000011_12
TS23: clavicle Strong Uniform euxassay_000011_12
TS23: metanephros Moderate Uniform euxassay_000011_12
TS23: peripheral nervous system Moderate Uniform euxassay_000011_12
TS23: dorsal root ganglion Moderate Uniform euxassay_000011_12
TS23: vertebral axis musculature Weak Regionally restricted euxassay_000011_12
Specimen euxassay_000011_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart Strong Regionally restricted euxassay_000011_13
TS23: cerebral cortex ventricular layer Weak Uniform euxassay_000011_13
TS23: dorsal root ganglion Moderate Uniform euxassay_000011_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000011_13
TS23: clavicle Moderate Regionally restricted euxassay_000011_13
Specimen euxassay_000011_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart Moderate Uniform euxassay_000011_14
TS23: thymus primordium Weak Graded euxassay_000011_14
TS23: lower jaw tooth Moderate Regionally restricted euxassay_000011_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000011_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000011_14
TS23: turbinate bone primordium Moderate Uniform euxassay_000011_14
TS23: nasal cavity Moderate Uniform euxassay_000011_14
TS23: nucleus pulposus Strong Uniform euxassay_000011_14
TS23: dorsal root ganglion Weak Uniform euxassay_000011_14
Specimen euxassay_000011_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vomeronasal organ Moderate Regionally restricted euxassay_000011_15
TS23: nasal septum Moderate Regionally restricted euxassay_000011_15
TS23: physiological umbilical hernia Strong Regionally restricted euxassay_000011_15
TS23: heart Moderate Regionally restricted euxassay_000011_15
TS23: nucleus pulposus Strong Uniform euxassay_000011_15
TS23: thymus primordium Weak Uniform euxassay_000011_15
Specimen euxassay_000011_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Weak Regionally restricted euxassay_000011_16
TS23: nucleus pulposus Strong Uniform euxassay_000011_16
TS23: heart Weak Regionally restricted euxassay_000011_16
Specimen euxassay_000011_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nucleus pulposus Strong Uniform euxassay_000011_17
TS23: vertebral axis musculature Weak Uniform euxassay_000011_17
TS23: tail mesenchyme Weak Uniform euxassay_000011_17
TS23: cerebral cortex ventricular layer Moderate Graded euxassay_000011_17
TS23: cerebral cortex marginal layer Moderate Graded euxassay_000011_17
TS23: heart Weak Uniform euxassay_000011_17
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_000011_17
Specimen euxassay_000011_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000011_18
TS23: facial ganglion Strong Regionally restricted euxassay_000011_18
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_18
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_000011_18
TS23: heart Strong Regionally restricted euxassay_000011_18
TS23: physiological umbilical hernia Strong Regionally restricted euxassay_000011_18
TS23: thymus primordium Weak Regionally restricted euxassay_000011_18
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000011_18
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000011_18
TS23: nucleus pulposus Strong Uniform euxassay_000011_18
Specimen euxassay_000011_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_000011_19
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000011_19
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000011_19
TS23: heart Moderate Regionally restricted euxassay_000011_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000011_19
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_000011_19
Specimen euxassay_000011_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: physiological umbilical hernia Strong Regionally restricted euxassay_000011_20
TS23: cerebral cortex ventricular layer Strong Regionally restricted euxassay_000011_20
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_000011_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000011_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000011_20
TS23: mandible Strong Regionally restricted euxassay_000011_20
TS23: vertebral axis musculature Strong Regionally restricted euxassay_000011_20
TS23: heart Strong Regionally restricted euxassay_000011_20
TS23: dorsal root ganglion Moderate Uniform euxassay_000011_20
TS23: clavicle Strong Regionally restricted euxassay_000011_20
Specimen euxassay_000011_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_000011_22
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_22
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_000011_22
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000011_22
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000011_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000011_22
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000011_22
Specimen euxassay_000011_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000011_23
TS23: vibrissa Moderate Regionally restricted euxassay_000011_23
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_23
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_000011_23
TS23: lung Weak Spotted euxassay_000011_23
Specimen euxassay_000011_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000011_24
TS23: vibrissa Moderate Spotted euxassay_000011_24
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000011_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory