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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827124
Gene symbol: Pde9a
Gene name: phosphodiesterase 9A
Probe: MGC clone 74300
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005191_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_01
TS23: limb Weak Regionally restricted euxassay_005191_01
Specimen euxassay_005191_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005191_02
TS23: retina Moderate Regionally restricted euxassay_005191_02
TS23: lung Weak Regionally restricted euxassay_005191_02
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_02
TS23: limb Weak Regionally restricted euxassay_005191_02
Specimen euxassay_005191_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005191_03
TS23: retina Moderate Regionally restricted euxassay_005191_03
TS23: lung Weak Regionally restricted euxassay_005191_03
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_03
TS23: stomach Weak Regionally restricted euxassay_005191_03
TS23: limb Weak Regionally restricted euxassay_005191_03
Specimen euxassay_005191_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005191_04
TS23: retina Moderate Regionally restricted euxassay_005191_04
TS23: lung Weak Regionally restricted euxassay_005191_04
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_04
TS23: stomach Weak Regionally restricted euxassay_005191_04
TS23: limb Weak Regionally restricted euxassay_005191_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_04
Specimen euxassay_005191_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005191_05
TS23: retina Strong Regionally restricted euxassay_005191_05
TS23: lung Moderate Regionally restricted euxassay_005191_05
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_05
TS23: stomach Weak Regionally restricted euxassay_005191_05
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_05
TS23: limb Weak Regionally restricted euxassay_005191_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_05
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_05
Specimen euxassay_005191_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_06
TS23: lung Weak Regionally restricted euxassay_005191_06
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_06
TS23: stomach Weak Regionally restricted euxassay_005191_06
TS23: limb Weak Regionally restricted euxassay_005191_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_06
Specimen euxassay_005191_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_07
TS23: lung Moderate Regionally restricted euxassay_005191_07
TS23: metanephros Moderate Regionally restricted euxassay_005191_07
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_07
TS23: stomach Weak Regionally restricted euxassay_005191_07
TS23: limb Weak Regionally restricted euxassay_005191_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_005191_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_07
Specimen euxassay_005191_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_08
TS23: lung Moderate Regionally restricted euxassay_005191_08
TS23: metanephros Moderate Regionally restricted euxassay_005191_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005191_08
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_08
TS23: stomach Moderate Regionally restricted euxassay_005191_08
TS23: limb Weak Regionally restricted euxassay_005191_08
TS23: upper jaw molar Weak Regionally restricted euxassay_005191_08
TS23: lower jaw molar Weak Regionally restricted euxassay_005191_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_08
Specimen euxassay_005191_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_09
TS23: spinal cord Moderate Regionally restricted euxassay_005191_09
TS23: lung Moderate Regionally restricted euxassay_005191_09
TS23: metanephros Moderate Regionally restricted euxassay_005191_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005191_09
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_09
TS23: stomach Moderate Regionally restricted euxassay_005191_09
TS23: limb Moderate Regionally restricted euxassay_005191_09
TS23: oral epithelium Weak Regionally restricted euxassay_005191_09
TS23: lower jaw molar Weak Regionally restricted euxassay_005191_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_005191_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005191_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005191_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_005191_09
Specimen euxassay_005191_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_10
TS23: spinal cord Moderate Regionally restricted euxassay_005191_10
TS23: lung Weak Regionally restricted euxassay_005191_10
TS23: metanephros Weak Regionally restricted euxassay_005191_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_005191_10
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_10
TS23: stomach Moderate Regionally restricted euxassay_005191_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_10
TS23: limb Moderate Regionally restricted euxassay_005191_10
TS23: oral epithelium Weak Regionally restricted euxassay_005191_10
TS23: trigeminal nerve Moderate Regionally restricted euxassay_005191_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_10
Specimen euxassay_005191_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_11
TS23: spinal cord Moderate Regionally restricted euxassay_005191_11
TS23: lung Weak Regionally restricted euxassay_005191_11
TS23: metanephros Moderate Regionally restricted euxassay_005191_11
TS23: submandibular gland primordium Weak Regionally restricted euxassay_005191_11
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_11
TS23: stomach Moderate Regionally restricted euxassay_005191_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_11
TS23: oral epithelium Weak Regionally restricted euxassay_005191_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_11
Specimen euxassay_005191_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_12
TS23: spinal cord Moderate Regionally restricted euxassay_005191_12
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_12
TS23: stomach Moderate Regionally restricted euxassay_005191_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_12
TS23: oral epithelium Weak Regionally restricted euxassay_005191_12
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_12
TS23: tongue mesenchyme Weak Regionally restricted euxassay_005191_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_12
Specimen euxassay_005191_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_13
TS23: spinal cord Moderate Regionally restricted euxassay_005191_13
TS23: lung Weak Regionally restricted euxassay_005191_13
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005191_13
TS23: midgut Moderate Regionally restricted euxassay_005191_13
TS23: naris Weak Regionally restricted euxassay_005191_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_13
TS23: oral epithelium Weak Regionally restricted euxassay_005191_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_005191_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_005191_13
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_13
TS23: tongue mesenchyme Weak Regionally restricted euxassay_005191_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_13
Specimen euxassay_005191_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_14
TS23: spinal cord Moderate Regionally restricted euxassay_005191_14
TS23: lung Weak Regionally restricted euxassay_005191_14
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_14
TS23: bladder Moderate Regionally restricted euxassay_005191_14
TS23: midgut Moderate Regionally restricted euxassay_005191_14
TS23: naris Weak Regionally restricted euxassay_005191_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_14
TS23: tail Weak Regionally restricted euxassay_005191_14
TS23: oral epithelium Weak Regionally restricted euxassay_005191_14
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_14
TS23: tongue mesenchyme Weak Regionally restricted euxassay_005191_14
Specimen euxassay_005191_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_15
TS23: spinal cord Moderate Regionally restricted euxassay_005191_15
TS23: lung Moderate Regionally restricted euxassay_005191_15
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_15
TS23: bladder Moderate Regionally restricted euxassay_005191_15
TS23: midgut Moderate Regionally restricted euxassay_005191_15
TS23: rectum Moderate Regionally restricted euxassay_005191_15
TS23: naris Weak Regionally restricted euxassay_005191_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_15
TS23: tail Weak Regionally restricted euxassay_005191_15
TS23: oral epithelium Weak Regionally restricted euxassay_005191_15
TS23: tongue mesenchyme Weak Regionally restricted euxassay_005191_15
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_15
Specimen euxassay_005191_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_16
TS23: lung Moderate Regionally restricted euxassay_005191_16
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_16
TS23: bladder Moderate Regionally restricted euxassay_005191_16
TS23: midgut Moderate Regionally restricted euxassay_005191_16
TS23: rectum Moderate Regionally restricted euxassay_005191_16
TS23: naris Weak Regionally restricted euxassay_005191_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_16
TS23: tail Moderate Regionally restricted euxassay_005191_16
TS23: oral epithelium Weak Regionally restricted euxassay_005191_16
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_16
TS23: tongue mesenchyme Weak Regionally restricted euxassay_005191_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_005191_16
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_005191_16
Specimen euxassay_005191_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_17
TS23: lung Moderate Regionally restricted euxassay_005191_17
TS23: metanephros Moderate Regionally restricted euxassay_005191_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005191_17
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_17
TS23: bladder Moderate Regionally restricted euxassay_005191_17
TS23: midgut Strong Regionally restricted euxassay_005191_17
TS23: naris Weak Regionally restricted euxassay_005191_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_17
TS23: tail Strong Regionally restricted euxassay_005191_17
TS23: oral epithelium Weak Regionally restricted euxassay_005191_17
TS23: lower jaw incisor Weak Regionally restricted euxassay_005191_17
TS23: upper jaw incisor Weak Regionally restricted euxassay_005191_17
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_17
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_17
TS23: cervical ganglion Weak Regionally restricted euxassay_005191_17
Specimen euxassay_005191_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_18
TS23: lung Moderate Regionally restricted euxassay_005191_18
TS23: metanephros Moderate Regionally restricted euxassay_005191_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005191_18
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_18
TS23: midgut Moderate Regionally restricted euxassay_005191_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_18
TS23: naris Weak Regionally restricted euxassay_005191_18
TS23: tail Strong Regionally restricted euxassay_005191_18
TS23: oral epithelium Weak Regionally restricted euxassay_005191_18
TS23: lower jaw incisor Weak Regionally restricted euxassay_005191_18
TS23: tongue epithelium Weak Regionally restricted euxassay_005191_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_005191_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_18
Specimen euxassay_005191_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_19
TS23: lung Moderate Regionally restricted euxassay_005191_19
TS23: metanephros Moderate Regionally restricted euxassay_005191_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005191_19
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_19
TS23: midgut Weak Regionally restricted euxassay_005191_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_19
TS23: tail Strong Regionally restricted euxassay_005191_19
TS23: oral epithelium Weak Regionally restricted euxassay_005191_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_19
Specimen euxassay_005191_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_20
TS23: lung Weak Regionally restricted euxassay_005191_20
TS23: metanephros Weak Regionally restricted euxassay_005191_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005191_20
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_20
TS23: midgut Weak Regionally restricted euxassay_005191_20
TS23: olfactory epithelium Weak Regionally restricted euxassay_005191_20
TS23: tail Moderate Regionally restricted euxassay_005191_20
TS23: lower jaw molar Weak Regionally restricted euxassay_005191_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_20
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_20
Specimen euxassay_005191_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_21
TS23: lung Moderate Regionally restricted euxassay_005191_21
TS23: metanephros Moderate Regionally restricted euxassay_005191_21
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_21
TS23: midgut Weak Regionally restricted euxassay_005191_21
TS23: upper jaw molar Weak Regionally restricted euxassay_005191_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_21
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005191_21
Specimen euxassay_005191_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_22
TS23: lung Moderate Regionally restricted euxassay_005191_22
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_22
TS23: midgut Weak Regionally restricted euxassay_005191_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_005191_22
Specimen euxassay_005191_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_23
TS23: lung Weak Regionally restricted euxassay_005191_23
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_23
Specimen euxassay_005191_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_005191_24
TS23: retina Moderate Regionally restricted euxassay_005191_24
TS23: embryo mesenchyme Weak Regionally restricted euxassay_005191_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory