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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827116
Gene symbol: Pde10a
Gene name: phosphodiesterase 10A
Probe: IMAGE clone 760844
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen 6C - Pde10a: embryonic day 14.5 (more )
Note: The probe used to generate this specimen was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: thalamus Strong Non-Uniform 6C Pd310a right , 6C composite , 6C Pde10a left There is a strong signal at the anterior pole of the thalamus (showing a sharp edge of its expression domain at the limit with the prethalamus); expression levels become progressively weaker towards the caudal pole.
Specimen euxassay_000057_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Moderate Regionally restricted euxassay_000057_01
TS23: neural retina Moderate Uniform euxassay_000057_01
Specimen euxassay_000057_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Moderate Regionally restricted euxassay_000057_02
TS23: neural retina Weak Uniform euxassay_000057_02
Specimen euxassay_000057_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_000057_03
TS23: neural retina Moderate Uniform euxassay_000057_03
Specimen euxassay_000057_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_000057_04
TS23: trigeminal ganglion Strong Uniform euxassay_000057_04
TS23: neural retina Moderate Uniform euxassay_000057_04
Specimen euxassay_000057_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000057_05
TS23: telencephalon Strong Regionally restricted euxassay_000057_05
Specimen euxassay_000057_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Strong Regionally restricted euxassay_000057_06
TS23: trigeminal ganglion Strong Uniform euxassay_000057_06
TS23: cerebellum Moderate Regionally restricted euxassay_000057_06
Specimen euxassay_000057_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Strong Regionally restricted euxassay_000057_07
TS23: cerebellum Moderate Regionally restricted euxassay_000057_07
TS23: trigeminal ganglion Strong Uniform euxassay_000057_07
Specimen euxassay_000057_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Strong Regionally restricted euxassay_000057_08
TS23: metencephalon lateral wall Strong Regionally restricted euxassay_000057_08
TS23: trigeminal ganglion Strong Uniform euxassay_000057_08
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000057_08
Specimen euxassay_000057_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000057_09
TS23: trigeminal ganglion Strong Uniform euxassay_000057_09
TS23: vagus ganglion Strong Uniform euxassay_000057_09
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000057_09
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_09
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_09
TS23: telencephalon Moderate Regionally restricted euxassay_000057_09
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_09
TS23: dorsal root ganglion Strong Uniform euxassay_000057_09
Specimen euxassay_000057_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Uniform euxassay_000057_10
TS23: vagus ganglion Strong Uniform euxassay_000057_10
TS23: facial ganglion Strong Uniform euxassay_000057_10
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_10
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_10
TS23: pons Strong Regionally restricted euxassay_000057_10
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_10
TS23: thalamus Strong Regionally restricted euxassay_000057_10
TS23: telencephalon Moderate Regionally restricted euxassay_000057_10
Specimen euxassay_000057_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_11
TS23: thalamus Strong Regionally restricted euxassay_000057_11
TS23: telencephalon Moderate Regionally restricted euxassay_000057_11
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_11
TS23: pons Strong Regionally restricted euxassay_000057_11
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_11
TS23: dorsal root ganglion Strong Uniform euxassay_000057_11
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_11
Specimen euxassay_000057_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_000057_12
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_12
TS23: thalamus Strong Regionally restricted euxassay_000057_12
TS23: telencephalon Moderate Regionally restricted euxassay_000057_12
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_12
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_12
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_12
TS23: midbrain roof plate Moderate Regionally restricted euxassay_000057_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000057_12
TS23: spinal cord Moderate Regionally restricted euxassay_000057_12
Specimen euxassay_000057_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_000057_13
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_13
TS23: thalamus Moderate Regionally restricted euxassay_000057_13
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_13
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_13
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_13
TS23: midbrain roof plate Moderate Regionally restricted euxassay_000057_13
TS23: spinal cord Moderate Regionally restricted euxassay_000057_13
TS23: dorsal root ganglion Moderate Uniform euxassay_000057_13
Specimen euxassay_000057_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_000057_14
TS23: epithalamus Moderate Regionally restricted euxassay_000057_14
TS23: diencephalon roof plate Moderate Regionally restricted euxassay_000057_14
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_14
TS23: medulla oblongata floor plate Moderate Regionally restricted euxassay_000057_14
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000057_14
TS23: midbrain roof plate Moderate Regionally restricted euxassay_000057_14
TS23: midbrain floor plate Moderate Regionally restricted euxassay_000057_14
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_000057_14
TS23: spinal cord Moderate Regionally restricted euxassay_000057_14
TS23: telencephalon Moderate Regionally restricted euxassay_000057_14
Specimen euxassay_000057_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Regionally restricted euxassay_000057_15
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_000057_15
TS23: midbrain roof plate Moderate Regionally restricted euxassay_000057_15
TS23: midbrain floor plate Moderate Regionally restricted euxassay_000057_15
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000057_15
TS23: medulla oblongata floor plate Moderate Regionally restricted euxassay_000057_15
TS23: diencephalon roof plate Moderate Regionally restricted euxassay_000057_15
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_15
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_000057_15
TS23: telencephalon Moderate Regionally restricted euxassay_000057_15
Specimen euxassay_000057_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_000057_16
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_16
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_16
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_16
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_16
TS23: spinal cord Moderate Regionally restricted euxassay_000057_16
TS23: thalamus Strong Regionally restricted euxassay_000057_16
Specimen euxassay_000057_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_000057_17
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_17
TS23: telencephalon Moderate Regionally restricted euxassay_000057_17
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_17
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_17
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_17
TS23: spinal cord Moderate Regionally restricted euxassay_000057_17
TS23: pons Strong Regionally restricted euxassay_000057_17
TS23: thalamus Strong Regionally restricted euxassay_000057_17
Specimen euxassay_000057_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_000057_18
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_18
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_18
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_18
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_18
TS23: telencephalon Moderate Regionally restricted euxassay_000057_18
TS23: spinal cord Moderate Regionally restricted euxassay_000057_18
TS23: dorsal root ganglion Strong Uniform euxassay_000057_18
TS23: pons Strong Regionally restricted euxassay_000057_18
TS23: thalamus Strong Regionally restricted euxassay_000057_18
Specimen euxassay_000057_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_19
TS23: telencephalon Moderate Regionally restricted euxassay_000057_19
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_19
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_19
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_19
TS23: dorsal root ganglion Strong Uniform euxassay_000057_19
TS23: trigeminal ganglion Strong Uniform euxassay_000057_19
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000057_19
TS23: vagus ganglion Strong Uniform euxassay_000057_19
TS23: pons Strong Regionally restricted euxassay_000057_19
TS23: thalamus Strong Regionally restricted euxassay_000057_19
Specimen euxassay_000057_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_000057_20
TS23: telencephalon Moderate Regionally restricted euxassay_000057_20
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_000057_20
TS23: metencephalon alar plate Moderate Regionally restricted euxassay_000057_20
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_20
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000057_20
TS23: trigeminal ganglion Strong Uniform euxassay_000057_20
TS23: vagus ganglion Strong Uniform euxassay_000057_20
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000057_20
TS23: dorsal root ganglion Strong Uniform euxassay_000057_20
Specimen euxassay_000057_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000057_21
TS23: vagus ganglion Strong Uniform euxassay_000057_21
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000057_21
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_000057_21
TS23: metencephalon alar plate Moderate Regionally restricted euxassay_000057_21
TS23: telencephalon Moderate Regionally restricted euxassay_000057_21
Specimen euxassay_000057_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_000057_22
TS23: telencephalon Moderate Regionally restricted euxassay_000057_22
TS23: trigeminal ganglion Strong Uniform euxassay_000057_22
Specimen euxassay_000057_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000057_23
TS23: telencephalon Strong Regionally restricted euxassay_000057_23
Specimen euxassay_000057_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Strong Regionally restricted euxassay_000057_24
TS23: trigeminal ganglion Strong Uniform euxassay_000057_24
TS23: neural retina Strong Uniform euxassay_000057_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory