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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827082
Gene symbol: Pcdha7
Gene name: protocadherin alpha 7
Probe: MGC clone 90581
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008269_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_008269_01
TS23: brain Strong Regionally restricted euxassay_008269_01
TS23: stomach Strong Spotted euxassay_008269_01
TS23: foot Moderate Regionally restricted euxassay_008269_01
TS23: hand Moderate Regionally restricted euxassay_008269_01
Specimen euxassay_008269_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_008269_02
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_02
TS23: brain Strong Regionally restricted euxassay_008269_02
TS23: stomach Strong Spotted euxassay_008269_02
TS23: foot Moderate Regionally restricted euxassay_008269_02
TS23: hand Moderate Regionally restricted euxassay_008269_02
Specimen euxassay_008269_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_03
TS23: facial ganglion Strong Regionally restricted euxassay_008269_03
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_03
TS23: brain Strong Regionally restricted euxassay_008269_03
TS23: stomach Strong Spotted euxassay_008269_03
TS23: midgut Strong Spotted euxassay_008269_03
TS23: foot Moderate Regionally restricted euxassay_008269_03
Specimen euxassay_008269_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_04
TS23: facial ganglion Strong Regionally restricted euxassay_008269_04
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_04
TS23: upper jaw molar Strong Regionally restricted euxassay_008269_04
TS23: lower jaw molar Strong Regionally restricted euxassay_008269_04
TS23: brain Strong Regionally restricted euxassay_008269_04
TS23: stomach Strong Spotted euxassay_008269_04
TS23: midgut Strong Spotted euxassay_008269_04
TS23: foot Moderate Regionally restricted euxassay_008269_04
Specimen euxassay_008269_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_05
TS23: facial ganglion Strong Regionally restricted euxassay_008269_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_008269_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_05
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_05
TS23: upper jaw molar Strong Regionally restricted euxassay_008269_05
TS23: lower jaw molar Strong Regionally restricted euxassay_008269_05
TS23: brain Strong Regionally restricted euxassay_008269_05
TS23: stomach Strong Spotted euxassay_008269_05
TS23: midgut Strong Spotted euxassay_008269_05
TS23: foot Moderate Regionally restricted euxassay_008269_05
Specimen euxassay_008269_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_008269_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_008269_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_06
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_06
TS23: brain Strong Regionally restricted euxassay_008269_06
TS23: stomach Strong Spotted euxassay_008269_06
TS23: midgut Strong Spotted euxassay_008269_06
Specimen euxassay_008269_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_008269_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_07
TS23: vagus ganglion Strong Regionally restricted euxassay_008269_07
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_07
TS23: brain Strong Regionally restricted euxassay_008269_07
TS23: stomach Strong Spotted euxassay_008269_07
TS23: midgut Strong Spotted euxassay_008269_07
Specimen euxassay_008269_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_08
TS23: cervical ganglion Strong Regionally restricted euxassay_008269_08
TS23: brain Strong Regionally restricted euxassay_008269_08
TS23: stomach Strong Spotted euxassay_008269_08
TS23: midgut Strong Spotted euxassay_008269_08
Specimen euxassay_008269_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_09
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008269_09
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_09
TS23: brain Strong Regionally restricted euxassay_008269_09
TS23: spinal cord Strong Regionally restricted euxassay_008269_09
TS23: midgut Strong Spotted euxassay_008269_09
Specimen euxassay_008269_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_10
TS23: tongue Moderate Spotted euxassay_008269_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_10
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008269_10
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_10
TS23: brain Strong Regionally restricted euxassay_008269_10
TS23: spinal cord Strong Regionally restricted euxassay_008269_10
TS23: midgut Strong Spotted euxassay_008269_10
Specimen euxassay_008269_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_11
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_11
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008269_11
TS23: brain Strong Regionally restricted euxassay_008269_11
TS23: spinal cord Strong Regionally restricted euxassay_008269_11
TS23: midgut Strong Spotted euxassay_008269_11
Specimen euxassay_008269_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_12
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_12
TS23: brain Strong Regionally restricted euxassay_008269_12
TS23: spinal cord Strong Regionally restricted euxassay_008269_12
TS23: midgut Strong Spotted euxassay_008269_12
Specimen euxassay_008269_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_13
TS23: tongue Strong Spotted euxassay_008269_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_13
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_13
TS23: brain Strong Regionally restricted euxassay_008269_13
TS23: spinal cord Strong Regionally restricted euxassay_008269_13
TS23: midgut Strong Spotted euxassay_008269_13
Specimen euxassay_008269_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_008269_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_14
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_14
TS23: brain Strong Regionally restricted euxassay_008269_14
TS23: spinal cord Strong Regionally restricted euxassay_008269_14
TS23: midgut Strong Spotted euxassay_008269_14
Specimen euxassay_008269_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_15
TS23: trigeminal nerve Strong Regionally restricted euxassay_008269_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_15
TS23: thoracic ganglion Strong Regionally restricted euxassay_008269_15
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008269_15
TS23: brain Strong Regionally restricted euxassay_008269_15
TS23: spinal cord Strong Regionally restricted euxassay_008269_15
TS23: midgut Strong Spotted euxassay_008269_15
Specimen euxassay_008269_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_008269_16
TS23: upper jaw molar Strong Regionally restricted euxassay_008269_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_16
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008269_16
TS23: cervical ganglion Strong Regionally restricted euxassay_008269_16
TS23: brain Strong Regionally restricted euxassay_008269_16
TS23: spinal cord Strong Regionally restricted euxassay_008269_16
TS23: midgut Strong Spotted euxassay_008269_16
Specimen euxassay_008269_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_008269_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_17
TS23: lower jaw molar Strong Regionally restricted euxassay_008269_17
TS23: upper jaw molar Strong Regionally restricted euxassay_008269_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_17
TS23: cervical ganglion Strong Regionally restricted euxassay_008269_17
TS23: brain Strong Regionally restricted euxassay_008269_17
TS23: spinal cord Strong Regionally restricted euxassay_008269_17
TS23: midgut Strong Spotted euxassay_008269_17
Specimen euxassay_008269_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_18
TS23: facial ganglion Strong Regionally restricted euxassay_008269_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_008269_18
TS23: lower jaw molar Strong Regionally restricted euxassay_008269_18
TS23: upper jaw molar Strong Regionally restricted euxassay_008269_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008269_18
TS23: brain Strong Regionally restricted euxassay_008269_18
TS23: midgut Strong Spotted euxassay_008269_18
Specimen euxassay_008269_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_19
TS23: facial ganglion Strong Regionally restricted euxassay_008269_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008269_19
TS23: brain Strong Regionally restricted euxassay_008269_19
TS23: foot Moderate Regionally restricted euxassay_008269_19
Specimen euxassay_008269_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_008269_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008269_20
TS23: facial ganglion Strong Regionally restricted euxassay_008269_20
TS23: brain Strong Regionally restricted euxassay_008269_20
TS23: foot Moderate Regionally restricted euxassay_008269_20
Specimen euxassay_008269_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_008269_21
TS23: brain Strong Regionally restricted euxassay_008269_21
TS23: foot Moderate Regionally restricted euxassay_008269_21
Specimen euxassay_008269_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_008269_22
TS23: brain Strong Regionally restricted euxassay_008269_22
TS23: foot Moderate Regionally restricted euxassay_008269_22
Specimen euxassay_008269_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_008269_23
TS23: foot Moderate Regionally restricted euxassay_008269_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory