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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826853
Gene symbol: Olfm1
Gene name: olfactomedin 1
Probe: MGC clone 35933
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003026_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_01
TS23: neural retina Moderate Regionally restricted euxassay_003026_01
Specimen euxassay_003026_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_02
TS23: neural retina Moderate Regionally restricted euxassay_003026_02
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_003026_02
Specimen euxassay_003026_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_03
TS23: hindbrain Moderate Uniform euxassay_003026_03
TS23: neural retina Moderate Regionally restricted euxassay_003026_03
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_003026_03
Specimen euxassay_003026_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_04
TS23: facial ganglion Strong Regionally restricted euxassay_003026_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_04
TS23: hindbrain Moderate Uniform euxassay_003026_04
TS23: neural retina Moderate Regionally restricted euxassay_003026_04
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_003026_04
Specimen euxassay_003026_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_05
TS23: facial ganglion Strong Regionally restricted euxassay_003026_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_05
TS23: hindbrain Moderate Uniform euxassay_003026_05
TS23: midbrain Moderate Uniform euxassay_003026_05
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_003026_05
Specimen euxassay_003026_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_06
TS23: facial ganglion Strong Regionally restricted euxassay_003026_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003026_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_06
TS23: diencephalon Moderate Uniform euxassay_003026_06
TS23: hindbrain Moderate Uniform euxassay_003026_06
TS23: midbrain Moderate Uniform euxassay_003026_06
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_003026_06
Specimen euxassay_003026_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003026_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003026_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_07
TS23: midbrain Moderate Uniform euxassay_003026_07
TS23: hindbrain Moderate Uniform euxassay_003026_07
TS23: diencephalon Moderate Uniform euxassay_003026_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_003026_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_003026_07
Specimen euxassay_003026_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003026_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003026_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_08
TS23: midbrain Moderate Uniform euxassay_003026_08
TS23: hindbrain Moderate Uniform euxassay_003026_08
TS23: diencephalon Moderate Uniform euxassay_003026_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_003026_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_003026_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_003026_08
Specimen euxassay_003026_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_09
TS23: vagus ganglion Strong Regionally restricted euxassay_003026_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_09
TS23: midbrain Moderate Uniform euxassay_003026_09
TS23: hindbrain Moderate Uniform euxassay_003026_09
TS23: diencephalon Moderate Uniform euxassay_003026_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_09
Specimen euxassay_003026_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_10
TS23: spinal cord Moderate Uniform euxassay_003026_10
TS23: midbrain Moderate Uniform euxassay_003026_10
TS23: hindbrain Moderate Uniform euxassay_003026_10
TS23: diencephalon Moderate Uniform euxassay_003026_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_10
TS23: cervical ganglion Moderate Regionally restricted euxassay_003026_10
Specimen euxassay_003026_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_11
TS23: spinal cord Moderate Uniform euxassay_003026_11
TS23: midbrain Moderate Uniform euxassay_003026_11
TS23: hindbrain Moderate Uniform euxassay_003026_11
TS23: diencephalon Moderate Uniform euxassay_003026_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003026_11
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003026_11
Specimen euxassay_003026_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_12
TS23: spinal cord Moderate Uniform euxassay_003026_12
TS23: midbrain Moderate Uniform euxassay_003026_12
TS23: hindbrain Moderate Uniform euxassay_003026_12
TS23: diencephalon Moderate Uniform euxassay_003026_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003026_12
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003026_12
Specimen euxassay_003026_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_13
TS23: spinal cord Moderate Uniform euxassay_003026_13
TS23: diencephalon Moderate Uniform euxassay_003026_13
TS23: hindbrain Moderate Uniform euxassay_003026_13
TS23: midbrain Moderate Uniform euxassay_003026_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003026_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003026_13
TS23: nucleus pulposus Moderate Regionally restricted euxassay_003026_13
Specimen euxassay_003026_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_14
TS23: spinal cord Moderate Uniform euxassay_003026_14
TS23: midbrain Moderate Uniform euxassay_003026_14
TS23: hindbrain Moderate Uniform euxassay_003026_14
TS23: diencephalon Moderate Uniform euxassay_003026_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_14
TS23: axial skeleton Moderate Regionally restricted euxassay_003026_14
TS23: nucleus pulposus Moderate Regionally restricted euxassay_003026_14
Specimen euxassay_003026_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_15
TS23: spinal cord Moderate Uniform euxassay_003026_15
TS23: midbrain Moderate Uniform euxassay_003026_15
TS23: hindbrain Moderate Uniform euxassay_003026_15
TS23: diencephalon Moderate Uniform euxassay_003026_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003026_15
TS23: axial skeleton Moderate Regionally restricted euxassay_003026_15
TS23: nucleus pulposus Moderate Regionally restricted euxassay_003026_15
Specimen euxassay_003026_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_16
TS23: spinal cord Moderate Uniform euxassay_003026_16
TS23: midbrain Moderate Uniform euxassay_003026_16
TS23: hindbrain Moderate Uniform euxassay_003026_16
TS23: diencephalon Moderate Uniform euxassay_003026_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_16
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003026_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003026_16
TS23: axial skeleton Moderate Regionally restricted euxassay_003026_16
Specimen euxassay_003026_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_17
TS23: spinal cord Moderate Uniform euxassay_003026_17
TS23: midbrain Moderate Uniform euxassay_003026_17
TS23: hindbrain Moderate Uniform euxassay_003026_17
TS23: diencephalon Moderate Uniform euxassay_003026_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003026_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003026_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003026_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_003026_17
TS23: axial skeleton Moderate Regionally restricted euxassay_003026_17
Specimen euxassay_003026_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_18
TS23: vagus ganglion Strong Regionally restricted euxassay_003026_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003026_18
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_18
TS23: spinal cord Moderate Uniform euxassay_003026_18
TS23: midbrain Moderate Uniform euxassay_003026_18
TS23: hindbrain Moderate Uniform euxassay_003026_18
TS23: diencephalon Moderate Uniform euxassay_003026_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003026_18
TS23: cervical ganglion Moderate Regionally restricted euxassay_003026_18
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003026_18
TS23: axial skeleton Moderate Regionally restricted euxassay_003026_18
Specimen euxassay_003026_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003026_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003026_19
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003026_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_19
TS23: hindbrain Moderate Uniform euxassay_003026_19
TS23: midbrain Moderate Uniform euxassay_003026_19
TS23: spinal cord Moderate Uniform euxassay_003026_19
TS23: diencephalon Moderate Uniform euxassay_003026_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_003026_19
Specimen euxassay_003026_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003026_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_20
TS23: hindbrain Moderate Uniform euxassay_003026_20
TS23: midbrain Moderate Uniform euxassay_003026_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003026_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_003026_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_003026_20
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_003026_20
Specimen euxassay_003026_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_21
TS23: facial ganglion Strong Regionally restricted euxassay_003026_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_21
TS23: hindbrain Moderate Uniform euxassay_003026_21
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_003026_21
Specimen euxassay_003026_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003026_22
TS23: facial ganglion Strong Regionally restricted euxassay_003026_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_22
TS23: hindbrain Moderate Uniform euxassay_003026_22
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_003026_22
Specimen euxassay_003026_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003026_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003026_23
TS23: neural retina Moderate Regionally restricted euxassay_003026_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory