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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826742
Gene symbol: Nod1
Gene name: nucleotide-binding oligomerization domain containing 1
Probe: IMAGE clone 2646058
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000245_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_000245_05
Specimen euxassay_000245_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_000245_06
Specimen euxassay_000245_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_000245_07
Specimen euxassay_000245_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: urethra Moderate Regionally restricted euxassay_000245_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: anal canal Moderate Regionally restricted euxassay_000245_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_000245_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_000245_12
Specimen euxassay_000245_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: urethra Moderate Regionally restricted euxassay_000245_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: anal canal Moderate Regionally restricted euxassay_000245_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_000245_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_000245_13
Specimen euxassay_000245_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000245_14
Specimen euxassay_000245_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000245_16
Specimen euxassay_000245_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_000245_22
Specimen euxassay_000245_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_000245_23
Specimen euxassay_000245_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_000245_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory