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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826710
Gene symbol: Nid1
Gene name: nidogen 1
Probe: EB2054 probe 1734
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009707_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_009707_01
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_01
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_01
TS23: diaphragm Weak Regionally restricted euxassay_009707_01
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_01
Specimen euxassay_009707_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_02
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_02
TS23: diaphragm Weak Regionally restricted euxassay_009707_02
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_02
Specimen euxassay_009707_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_03
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_03
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_03
TS23: diaphragm Weak Regionally restricted euxassay_009707_03
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_03
Specimen euxassay_009707_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_04
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_04
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_04
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_04
TS23: diaphragm Weak Regionally restricted euxassay_009707_04
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_04
Specimen euxassay_009707_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_009707_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_05
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_05
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_05
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_009707_05
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_05
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_05
TS23: diaphragm Weak Regionally restricted euxassay_009707_05
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_05
Specimen euxassay_009707_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_06
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_06
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_06
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_06
TS23: diaphragm Weak Regionally restricted euxassay_009707_06
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_009707_06
Specimen euxassay_009707_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_07
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_07
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_07
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_07
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_07
TS23: diaphragm Weak Regionally restricted euxassay_009707_07
Specimen euxassay_009707_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_009707_08
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_08
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_08
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_08
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_08
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_08
TS23: diaphragm Weak Regionally restricted euxassay_009707_08
Specimen euxassay_009707_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_09
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_09
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_09
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_09
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_09
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_09
TS23: diaphragm Weak Regionally restricted euxassay_009707_09
Specimen euxassay_009707_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_10
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_10
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_10
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_10
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_10
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009707_10
TS23: diaphragm Weak Regionally restricted euxassay_009707_10
Specimen euxassay_009707_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_11
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_11
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_11
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_11
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_11
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_11
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_009707_11
TS23: diaphragm Weak Regionally restricted euxassay_009707_11
Specimen euxassay_009707_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_12
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_12
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_12
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_12
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_12
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_12
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_12
TS23: diaphragm Weak Regionally restricted euxassay_009707_12
Specimen euxassay_009707_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_13
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_13
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_13
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_13
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_13
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_13
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_13
TS23: diaphragm Weak Regionally restricted euxassay_009707_13
Specimen euxassay_009707_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_14
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_14
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_14
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_14
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_14
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_14
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_14
TS23: diaphragm Weak Regionally restricted euxassay_009707_14
Specimen euxassay_009707_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_15
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_15
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_15
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_15
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_15
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_15
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_15
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_15
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_15
TS23: diaphragm Weak Regionally restricted euxassay_009707_15
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_009707_15
Specimen euxassay_009707_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_16
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_16
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_16
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_16
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_16
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_16
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009707_16
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_16
Specimen euxassay_009707_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_009707_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_17
TS23: pons ventricular layer Strong Regionally restricted euxassay_009707_17
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_17
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_17
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_17
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_009707_17
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_17
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_17
Specimen euxassay_009707_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_18
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_18
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_18
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_18
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_18
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_18
Specimen euxassay_009707_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_19
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_19
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_19
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_19
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_19
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_19
Specimen euxassay_009707_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_20
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_20
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_20
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_20
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_20
TS23: diaphragm Weak Regionally restricted euxassay_009707_20
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_20
Specimen euxassay_009707_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_21
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_21
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_21
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_21
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_21
TS23: diaphragm Weak Regionally restricted euxassay_009707_21
Specimen euxassay_009707_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lens Strong Regionally restricted euxassay_009707_22
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_22
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_22
Specimen euxassay_009707_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lens Strong Regionally restricted euxassay_009707_23
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_23
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory