About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826710
Gene symbol: Nid1
Gene name: nidogen 1
Probe: EB2054 probe 1734
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009707_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_009707_01
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_01
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_01
TS23: diaphragm Weak Regionally restricted euxassay_009707_01
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_01
Specimen euxassay_009707_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_02
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_02
TS23: diaphragm Weak Regionally restricted euxassay_009707_02
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_02
Specimen euxassay_009707_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_03
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_03
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_03
TS23: diaphragm Weak Regionally restricted euxassay_009707_03
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_03
Specimen euxassay_009707_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_04
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_04
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_04
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_04
TS23: diaphragm Weak Regionally restricted euxassay_009707_04
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_04
Specimen euxassay_009707_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_009707_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_05
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_05
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_05
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_009707_05
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_05
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_05
TS23: diaphragm Weak Regionally restricted euxassay_009707_05
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_05
Specimen euxassay_009707_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_06
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_06
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_06
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_06
TS23: diaphragm Weak Regionally restricted euxassay_009707_06
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_009707_06
Specimen euxassay_009707_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_07
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_07
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_07
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_07
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_07
TS23: diaphragm Weak Regionally restricted euxassay_009707_07
Specimen euxassay_009707_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_009707_08
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_08
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_08
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_08
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_08
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_08
TS23: diaphragm Weak Regionally restricted euxassay_009707_08
Specimen euxassay_009707_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_09
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_09
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_09
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_09
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_09
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_09
TS23: diaphragm Weak Regionally restricted euxassay_009707_09
Specimen euxassay_009707_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_10
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_10
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_10
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_10
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_10
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009707_10
TS23: diaphragm Weak Regionally restricted euxassay_009707_10
Specimen euxassay_009707_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_11
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_11
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_11
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_11
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_11
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_11
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_009707_11
TS23: diaphragm Weak Regionally restricted euxassay_009707_11
Specimen euxassay_009707_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_12
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_12
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_12
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_12
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_12
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_12
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_12
TS23: diaphragm Weak Regionally restricted euxassay_009707_12
Specimen euxassay_009707_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_13
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_13
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_13
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_13
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_13
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_13
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_13
TS23: diaphragm Weak Regionally restricted euxassay_009707_13
Specimen euxassay_009707_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_14
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_14
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_14
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_14
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_14
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_14
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_14
TS23: diaphragm Weak Regionally restricted euxassay_009707_14
Specimen euxassay_009707_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_15
TS23: dorsal grey horn Strong Regionally restricted euxassay_009707_15
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_15
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_15
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_15
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_15
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_15
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009707_15
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_15
TS23: diaphragm Weak Regionally restricted euxassay_009707_15
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_009707_15
Specimen euxassay_009707_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009707_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_16
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_16
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_16
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_16
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_16
TS23: spinal cord meninges Moderate Regionally restricted euxassay_009707_16
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_009707_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009707_16
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_16
Specimen euxassay_009707_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_009707_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_17
TS23: pons ventricular layer Strong Regionally restricted euxassay_009707_17
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_17
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_17
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_17
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_009707_17
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_17
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_17
Specimen euxassay_009707_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_18
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_18
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_18
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_18
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_18
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_18
Specimen euxassay_009707_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_19
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_19
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_19
TS23: diencephalon meninges Moderate Regionally restricted euxassay_009707_19
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_19
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_19
Specimen euxassay_009707_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_20
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_20
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_20
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_20
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_20
TS23: diaphragm Weak Regionally restricted euxassay_009707_20
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009707_20
Specimen euxassay_009707_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009707_21
TS23: midbrain meninges Moderate Regionally restricted euxassay_009707_21
TS23: hindbrain meninges Moderate Regionally restricted euxassay_009707_21
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_21
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_21
TS23: diaphragm Weak Regionally restricted euxassay_009707_21
Specimen euxassay_009707_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lens Strong Regionally restricted euxassay_009707_22
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_22
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_22
Specimen euxassay_009707_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lens Strong Regionally restricted euxassay_009707_23
TS23: telencephalon meninges Moderate Regionally restricted euxassay_009707_23
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009707_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory