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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826101
Gene symbol: Marchf1
Gene name: membrane associated ring-CH-type finger 1
Probe: IMAGE clone 1890205
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006253_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_02
TS23: amygdala Present euxassay_006253_02
Specimen euxassay_006253_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_03
TS23: amygdala Present euxassay_006253_03
Specimen euxassay_006253_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_04
TS23: amygdala Present euxassay_006253_04
TS23: hindbrain Strong Uniform euxassay_006253_04
Specimen euxassay_006253_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain Strong Uniform euxassay_006253_05
Specimen euxassay_006253_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_06
TS23: amygdala Present euxassay_006253_06
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_06
TS23: hippocampus Present euxassay_006253_06
TS23: hindbrain Strong Uniform euxassay_006253_06
Specimen euxassay_006253_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_07
TS23: amygdala Present euxassay_006253_07
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_07
TS23: hippocampus Present euxassay_006253_07
TS23: hindbrain Strong Uniform euxassay_006253_07
TS23: midbrain Strong Uniform euxassay_006253_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006253_07
Specimen euxassay_006253_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_08
TS23: amygdala Present euxassay_006253_08
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_08
TS23: hippocampus Present euxassay_006253_08
TS23: hindbrain Strong Uniform euxassay_006253_08
TS23: midbrain Strong Uniform euxassay_006253_08
TS23: diencephalon Strong Uniform euxassay_006253_08
Specimen euxassay_006253_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_09
TS23: amygdala Present euxassay_006253_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_09
TS23: hippocampus Present euxassay_006253_09
TS23: spinal cord Strong Uniform euxassay_006253_09
TS23: midbrain Strong Uniform euxassay_006253_09
TS23: hindbrain Strong Uniform euxassay_006253_09
TS23: diencephalon Strong Uniform euxassay_006253_09
Specimen euxassay_006253_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_10
TS23: amygdala Present euxassay_006253_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006253_10
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_10
TS23: hippocampus Present euxassay_006253_10
TS23: spinal cord Strong Uniform euxassay_006253_10
TS23: midbrain Strong Uniform euxassay_006253_10
TS23: hindbrain Strong Uniform euxassay_006253_10
TS23: diencephalon Strong Uniform euxassay_006253_10
TS23: adenohypophysis Weak Regionally restricted euxassay_006253_10
Specimen euxassay_006253_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006253_11
TS23: telencephalon septum Present euxassay_006253_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006253_11
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_11
TS23: hippocampus Present euxassay_006253_11
TS23: hindbrain Strong Uniform euxassay_006253_11
TS23: midbrain Strong Uniform euxassay_006253_11
TS23: spinal cord Strong Uniform euxassay_006253_11
TS23: diencephalon Strong Uniform euxassay_006253_11
TS23: adenohypophysis Weak Regionally restricted euxassay_006253_11
Specimen euxassay_006253_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006253_12
TS23: telencephalon septum Present euxassay_006253_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006253_12
TS23: diencephalon Strong Uniform euxassay_006253_12
TS23: spinal cord Strong Uniform euxassay_006253_12
TS23: midbrain Strong Uniform euxassay_006253_12
TS23: hindbrain Strong Uniform euxassay_006253_12
TS23: adenohypophysis Moderate Regionally restricted euxassay_006253_12
Specimen euxassay_006253_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_13
TS23: telencephalon septum Present euxassay_006253_13
TS23: diencephalon Strong Uniform euxassay_006253_13
TS23: hindbrain Strong Uniform euxassay_006253_13
TS23: midbrain Strong Uniform euxassay_006253_13
TS23: spinal cord Strong Uniform euxassay_006253_13
TS23: adenohypophysis Moderate Regionally restricted euxassay_006253_13
Specimen euxassay_006253_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_14
TS23: telencephalon septum Present euxassay_006253_14
TS23: spinal cord Strong Uniform euxassay_006253_14
TS23: midbrain Strong Uniform euxassay_006253_14
TS23: hindbrain Strong Uniform euxassay_006253_14
TS23: diencephalon Strong Uniform euxassay_006253_14
TS23: adenohypophysis Weak Regionally restricted euxassay_006253_14
Specimen euxassay_006253_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_15
TS23: telencephalon septum Present euxassay_006253_15
TS23: spinal cord Strong Uniform euxassay_006253_15
TS23: midbrain Strong Uniform euxassay_006253_15
TS23: hindbrain Strong Uniform euxassay_006253_15
TS23: diencephalon Strong Uniform euxassay_006253_15
Specimen euxassay_006253_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006253_16
TS23: spinal cord Strong Uniform euxassay_006253_16
TS23: midbrain Strong Uniform euxassay_006253_16
TS23: hindbrain Strong Uniform euxassay_006253_16
TS23: diencephalon Strong Uniform euxassay_006253_16
Specimen euxassay_006253_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006253_17
TS23: midbrain Strong Uniform euxassay_006253_17
TS23: hindbrain Strong Uniform euxassay_006253_17
TS23: diencephalon Strong Uniform euxassay_006253_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006253_17
Specimen euxassay_006253_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_18
TS23: amygdala Present euxassay_006253_18
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006253_18
TS23: diencephalon Strong Uniform euxassay_006253_18
TS23: midbrain Strong Uniform euxassay_006253_18
TS23: hindbrain Strong Uniform euxassay_006253_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_006253_18
Specimen euxassay_006253_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_19
TS23: amygdala Present euxassay_006253_19
TS23: midbrain Strong Uniform euxassay_006253_19
TS23: hindbrain Strong Uniform euxassay_006253_19
TS23: diencephalon Strong Uniform euxassay_006253_19
Specimen euxassay_006253_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_20
TS23: amygdala Present euxassay_006253_20
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_20
TS23: hippocampus Present euxassay_006253_20
TS23: hindbrain Strong Uniform euxassay_006253_20
TS23: midbrain Strong Uniform euxassay_006253_20
Specimen euxassay_006253_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_21
TS23: amygdala Present euxassay_006253_21
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006253_21
TS23: hippocampus Present euxassay_006253_21
TS23: hindbrain Strong Uniform euxassay_006253_21
Specimen euxassay_006253_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_22
TS23: amygdala Present euxassay_006253_22
Specimen euxassay_006253_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_23
TS23: amygdala Present euxassay_006253_23
Specimen euxassay_006253_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006253_24
TS23: amygdala Present euxassay_006253_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory