About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825486
Gene symbol: Htra1
Gene name: HtrA serine peptidase 1
Probe: MGC clone 19188
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005061_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_005061_01
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_005061_01
TS23: scapula Strong Regionally restricted euxassay_005061_01
TS23: shoulder rest of mesenchyme Strong Regionally restricted euxassay_005061_01
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005061_01
TS23: elbow rest of mesenchyme Strong Regionally restricted euxassay_005061_01
TS23: knee rest of mesenchyme Strong Regionally restricted euxassay_005061_01
Specimen euxassay_005061_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_005061_02
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_02
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_005061_02
TS23: humerus Strong Regionally restricted euxassay_005061_02
TS23: scapula Strong Regionally restricted euxassay_005061_02
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005061_02
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_005061_02
Specimen euxassay_005061_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_005061_03
TS23: lung Weak Regionally restricted euxassay_005061_03
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_005061_03
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_03
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_005061_03
TS23: axial musculature Moderate Regionally restricted euxassay_005061_03
TS23: humerus Strong Regionally restricted euxassay_005061_03
TS23: scapula Strong Regionally restricted euxassay_005061_03
TS23: foot mesenchyme Strong Regionally restricted euxassay_005061_03
TS23: upper leg rest of mesenchyme Strong Regionally restricted euxassay_005061_03
Specimen euxassay_005061_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_005061_04
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_005061_04
TS23: lung Weak Regionally restricted euxassay_005061_04
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_04
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_04
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_005061_04
TS23: axial musculature Strong Regionally restricted euxassay_005061_04
TS23: humerus Strong Regionally restricted euxassay_005061_04
TS23: hindlimb digit 3 metatarsal Strong Regionally restricted euxassay_005061_04
Specimen euxassay_005061_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_005061_05
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_005061_05
TS23: pancreas Weak Regionally restricted euxassay_005061_05
TS23: upper jaw molar Moderate Regionally restricted euxassay_005061_05
TS23: lower jaw molar Moderate Regionally restricted euxassay_005061_05
TS23: diaphragm Moderate Regionally restricted euxassay_005061_05
TS23: lung Weak Regionally restricted euxassay_005061_05
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_05
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_05
TS23: axial musculature Strong Regionally restricted euxassay_005061_05
TS23: humerus Strong Regionally restricted euxassay_005061_05
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_005061_05
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_005061_05
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_005061_05
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_005061_05
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_005061_05
Specimen euxassay_005061_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_005061_06
TS23: pancreas Weak Regionally restricted euxassay_005061_06
TS23: lower jaw molar Weak Regionally restricted euxassay_005061_06
TS23: diaphragm Moderate Regionally restricted euxassay_005061_06
TS23: lung Weak Regionally restricted euxassay_005061_06
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_06
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_06
Specimen euxassay_005061_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pancreas Weak Regionally restricted euxassay_005061_07
TS23: diaphragm Moderate Regionally restricted euxassay_005061_07
TS23: lung Weak Regionally restricted euxassay_005061_07
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_07
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_07
Specimen euxassay_005061_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: aorta Strong Regionally restricted euxassay_005061_08
TS23: tail mesenchyme Strong Regionally restricted euxassay_005061_08
TS23: diaphragm Moderate Regionally restricted euxassay_005061_08
TS23: lung Weak Regionally restricted euxassay_005061_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_08
TS23: anterior abdominal wall musculature Strong Regionally restricted euxassay_005061_08
TS23: sternum Moderate Regionally restricted euxassay_005061_08
Specimen euxassay_005061_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: aorta Strong Regionally restricted euxassay_005061_09
TS23: tongue Weak Regionally restricted euxassay_005061_09
TS23: upper jaw incisor Weak Regionally restricted euxassay_005061_09
TS23: tail mesenchyme Strong Regionally restricted euxassay_005061_09
TS23: diaphragm Moderate Regionally restricted euxassay_005061_09
TS23: lung Weak Regionally restricted euxassay_005061_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_09
TS23: sternum Moderate Regionally restricted euxassay_005061_09
Specimen euxassay_005061_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trachea Strong Regionally restricted euxassay_005061_10
TS23: aorta Strong Regionally restricted euxassay_005061_10
TS23: tongue muscle Weak Regionally restricted euxassay_005061_10
TS23: upper jaw incisor Weak Regionally restricted euxassay_005061_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_005061_10
TS23: tail mesenchyme Strong Regionally restricted euxassay_005061_10
TS23: diaphragm Moderate Regionally restricted euxassay_005061_10
TS23: nucleus pulposus Moderate Regionally restricted euxassay_005061_10
TS23: axial skeleton Moderate Regionally restricted euxassay_005061_10
TS23: lung Weak Regionally restricted euxassay_005061_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_10
TS23: diencephalon roof plate Strong Regionally restricted euxassay_005061_10
TS23: sternum Moderate Regionally restricted euxassay_005061_10
Specimen euxassay_005061_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trachea Strong Regionally restricted euxassay_005061_11
TS23: aorta Strong Regionally restricted euxassay_005061_11
TS23: tongue muscle Weak Regionally restricted euxassay_005061_11
TS23: tail mesenchyme Strong Regionally restricted euxassay_005061_11
TS23: diaphragm Moderate Regionally restricted euxassay_005061_11
TS23: axial skeleton Strong Regionally restricted euxassay_005061_11
TS23: lung Weak Regionally restricted euxassay_005061_11
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_005061_11
TS23: diencephalon roof plate Weak Regionally restricted euxassay_005061_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_005061_11
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_11
TS23: sternum Moderate Regionally restricted euxassay_005061_11
Specimen euxassay_005061_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: aorta Strong Regionally restricted euxassay_005061_12
TS23: tongue muscle Weak Regionally restricted euxassay_005061_12
TS23: tail mesenchyme Strong Regionally restricted euxassay_005061_12
TS23: diaphragm Moderate Regionally restricted euxassay_005061_12
TS23: axial skeleton Moderate Regionally restricted euxassay_005061_12
TS23: lung Weak Regionally restricted euxassay_005061_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_12
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_12
TS23: sternum Moderate Regionally restricted euxassay_005061_12
Specimen euxassay_005061_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_005061_13
TS23: tongue Weak Regionally restricted euxassay_005061_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_005061_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_005061_13
TS23: diaphragm Weak Regionally restricted euxassay_005061_13
TS23: axial skeleton Moderate Regionally restricted euxassay_005061_13
TS23: lung Weak Regionally restricted euxassay_005061_13
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_13
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_13
Specimen euxassay_005061_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_005061_14
TS23: tongue Weak Regionally restricted euxassay_005061_14
TS23: axial skeleton Moderate Regionally restricted euxassay_005061_14
TS23: lung Weak Regionally restricted euxassay_005061_14
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_14
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_14
TS23: anterior abdominal wall musculature Strong Regionally restricted euxassay_005061_14
TS23: axial musculature Strong Regionally restricted euxassay_005061_14
Specimen euxassay_005061_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_005061_15
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_15
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_15
TS23: axial musculature Strong Regionally restricted euxassay_005061_15
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_005061_15
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_005061_15
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_005061_15
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_005061_15
Specimen euxassay_005061_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw molar Weak Regionally restricted euxassay_005061_16
TS23: lung Weak Regionally restricted euxassay_005061_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_16
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_16
TS23: axial musculature Moderate Regionally restricted euxassay_005061_16
TS23: humerus Strong Regionally restricted euxassay_005061_16
TS23: foot mesenchyme Moderate Regionally restricted euxassay_005061_16
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_005061_16
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_005061_16
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_005061_16
Specimen euxassay_005061_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Weak Regionally restricted euxassay_005061_17
TS23: lower jaw molar Weak Regionally restricted euxassay_005061_17
TS23: lung Weak Regionally restricted euxassay_005061_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005061_17
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005061_17
TS23: axial musculature Moderate Regionally restricted euxassay_005061_17
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_005061_17
TS23: humerus Strong Regionally restricted euxassay_005061_17
TS23: foot mesenchyme Moderate Regionally restricted euxassay_005061_17
Specimen euxassay_005061_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_005061_18
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_005061_18
TS23: humerus Strong Regionally restricted euxassay_005061_18
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_005061_18
TS23: hand mesenchyme Strong Regionally restricted euxassay_005061_18
TS23: upper leg rest of mesenchyme Strong Regionally restricted euxassay_005061_18
Specimen euxassay_005061_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_005061_19
TS23: vibrissa Weak Regionally restricted euxassay_005061_19
TS23: axial musculature Moderate Regionally restricted euxassay_005061_19
TS23: humerus Strong Regionally restricted euxassay_005061_19
TS23: scapula Strong Regionally restricted euxassay_005061_19
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_005061_19
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005061_19
TS23: knee rest of mesenchyme Strong Regionally restricted euxassay_005061_19
Specimen euxassay_005061_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_005061_20
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005061_20
TS23: shoulder rest of mesenchyme Strong Regionally restricted euxassay_005061_20
TS23: elbow rest of mesenchyme Strong Regionally restricted euxassay_005061_20
TS23: knee rest of mesenchyme Strong Regionally restricted euxassay_005061_20
Specimen euxassay_005061_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_005061_21
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005061_21
TS23: knee rest of mesenchyme Strong Regionally restricted euxassay_005061_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory