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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825376
Gene symbol: H1f3
Gene name: H1.3 linker histone, cluster member
Probe: IMAGE clone 422048
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen 6A - Hist1h1d: embryonic day 14.5 (more )
Note: The probe used to generate this specimen was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Present Non-Uniform 6A composite , 6A Hist1h1d
Specimen euxassay_000515_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_01
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_01
TS23: midbrain marginal layer Strong Regionally restricted euxassay_000515_01
Specimen euxassay_000515_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_02
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_02
Specimen euxassay_000515_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_03
Specimen euxassay_000515_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_04
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_04
Specimen euxassay_000515_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_05
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_05
Specimen euxassay_000515_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_06
Specimen euxassay_000515_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_07
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_07
Specimen euxassay_000515_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_08
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_08
Specimen euxassay_000515_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_09
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_09
Specimen euxassay_000515_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_10
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000515_10
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_10
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_000515_10
Specimen euxassay_000515_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000515_11
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_000515_11
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_000515_11
Specimen euxassay_000515_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000515_12
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_000515_12
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_000515_12
Specimen euxassay_000515_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000515_13
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_13
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_000515_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_000515_13
Specimen euxassay_000515_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000515_14
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_14
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_000515_14
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_000515_14
Specimen euxassay_000515_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_15
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000515_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_15
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_000515_15
Specimen euxassay_000515_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_16
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000515_16
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_16
Specimen euxassay_000515_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_17
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_17
Specimen euxassay_000515_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_18
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_000515_18
Specimen euxassay_000515_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_19
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_19
Specimen euxassay_000515_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_20
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_20
Specimen euxassay_000515_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_21
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_21
Specimen euxassay_000515_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_22
TS23: rest of cerebellum ventricular layer Strong Uniform euxassay_000515_22
Specimen euxassay_000515_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_23
Specimen euxassay_000515_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000515_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory