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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825031
Gene symbol: Gde1
Gene name: glycerophosphodiester phosphodiesterase 1
Probe: MGC clone 6768
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003384_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_003384_01
Specimen euxassay_003384_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_02
TS23: neural retina Moderate Regionally restricted euxassay_003384_02
Specimen euxassay_003384_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_03
TS23: facial ganglion Strong Regionally restricted euxassay_003384_03
TS23: left lung Strong Spotted euxassay_003384_03
TS23: neural retina Moderate Regionally restricted euxassay_003384_03
Specimen euxassay_003384_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_04
TS23: facial ganglion Strong Regionally restricted euxassay_003384_04
TS23: stomach Moderate Regionally restricted euxassay_003384_04
TS23: left lung Strong Spotted euxassay_003384_04
TS23: neural retina Moderate Regionally restricted euxassay_003384_04
Specimen euxassay_003384_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003384_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003384_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_05
TS23: stomach Moderate Regionally restricted euxassay_003384_05
TS23: left lung Strong Spotted euxassay_003384_05
Specimen euxassay_003384_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003384_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003384_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_06
TS23: stomach Moderate Regionally restricted euxassay_003384_06
TS23: midgut loop Moderate Regionally restricted euxassay_003384_06
TS23: left lung Strong Spotted euxassay_003384_06
Specimen euxassay_003384_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_003384_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003384_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_07
TS23: midgut loop Moderate Regionally restricted euxassay_003384_07
TS23: stomach Moderate Regionally restricted euxassay_003384_07
TS23: cervical ganglion Moderate Regionally restricted euxassay_003384_07
TS23: left lung Strong Spotted euxassay_003384_07
Specimen euxassay_003384_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_08
TS23: stomach Moderate Regionally restricted euxassay_003384_08
TS23: midgut loop Moderate Regionally restricted euxassay_003384_08
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003384_08
TS23: cervical ganglion Moderate Regionally restricted euxassay_003384_08
TS23: left lung Strong Spotted euxassay_003384_08
Specimen euxassay_003384_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_09
TS23: midgut loop Moderate Regionally restricted euxassay_003384_09
TS23: stomach Moderate Regionally restricted euxassay_003384_09
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003384_09
TS23: left lung Strong Spotted euxassay_003384_09
Specimen euxassay_003384_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_10
TS23: midgut loop Moderate Regionally restricted euxassay_003384_10
TS23: left lung Strong Spotted euxassay_003384_10
Specimen euxassay_003384_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_11
TS23: right lung Strong Spotted euxassay_003384_11
Specimen euxassay_003384_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_12
TS23: midgut loop Moderate Regionally restricted euxassay_003384_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_12
Specimen euxassay_003384_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_13
TS23: midgut loop Moderate Regionally restricted euxassay_003384_13
TS23: midgut Moderate Regionally restricted euxassay_003384_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003384_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_13
Specimen euxassay_003384_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_14
TS23: midgut Moderate Regionally restricted euxassay_003384_14
TS23: hindgut Moderate Regionally restricted euxassay_003384_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003384_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_14
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003384_14
TS23: bladder Moderate Regionally restricted euxassay_003384_14
TS23: urethra Weak Regionally restricted euxassay_003384_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: right lung Strong Spotted euxassay_003384_14
Specimen euxassay_003384_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_15
TS23: rectum Moderate Regionally restricted euxassay_003384_15
TS23: midgut Moderate Regionally restricted euxassay_003384_15
TS23: hindgut Moderate Regionally restricted euxassay_003384_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003384_15
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003384_15
TS23: cervical ganglion Moderate Regionally restricted euxassay_003384_15
TS23: bladder Moderate Regionally restricted euxassay_003384_15
TS23: urethra Weak Regionally restricted euxassay_003384_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: right lung Strong Spotted euxassay_003384_15
Specimen euxassay_003384_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_003384_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003384_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003384_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_16
TS23: hindgut Moderate Regionally restricted euxassay_003384_16
TS23: midgut Moderate Regionally restricted euxassay_003384_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_16
TS23: right lung Strong Spotted euxassay_003384_16
Specimen euxassay_003384_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003384_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003384_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_17
TS23: midgut Moderate Regionally restricted euxassay_003384_17
TS23: hindgut Moderate Regionally restricted euxassay_003384_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_17
TS23: right lung Strong Spotted euxassay_003384_17
Specimen euxassay_003384_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003384_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003384_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_18
TS23: midgut Moderate Regionally restricted euxassay_003384_18
TS23: hindgut Moderate Regionally restricted euxassay_003384_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_18
TS23: right lung Strong Spotted euxassay_003384_18
Specimen euxassay_003384_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Regionally restricted euxassay_003384_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003384_19
TS23: midgut Moderate Regionally restricted euxassay_003384_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_19
TS23: right lung Strong Spotted euxassay_003384_19
Specimen euxassay_003384_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_20
TS23: facial ganglion Strong Regionally restricted euxassay_003384_20
TS23: midgut Moderate Regionally restricted euxassay_003384_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003384_20
TS23: right lung Strong Spotted euxassay_003384_20
Specimen euxassay_003384_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_21
TS23: facial ganglion Strong Regionally restricted euxassay_003384_21
TS23: midgut Moderate Regionally restricted euxassay_003384_21
TS23: right lung Strong Spotted euxassay_003384_21
Specimen euxassay_003384_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003384_22
TS23: right lung Strong Spotted euxassay_003384_22
Specimen euxassay_003384_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_003384_23
Specimen euxassay_003384_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_003384_24
TS23: neural retina Moderate Regionally restricted euxassay_003384_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory