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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824980
Gene symbol: Galnt1
Gene name: polypeptide N-acetylgalactosaminyltransferase 1
Probe: MGC clone 60538
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004959_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_004959_01
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_01
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_01
TS23: retina Moderate Regionally restricted euxassay_004959_01
Specimen euxassay_004959_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_004959_02
TS23: lung Strong Regionally restricted euxassay_004959_02
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_02
TS23: mandible Strong Regionally restricted euxassay_004959_02
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_02
TS23: retina Moderate Regionally restricted euxassay_004959_02
Specimen euxassay_004959_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_03
TS23: liver Moderate Regionally restricted euxassay_004959_03
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_03
TS23: maxilla Strong Regionally restricted euxassay_004959_03
TS23: mandible Strong Regionally restricted euxassay_004959_03
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_03
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_03
TS23: retina Moderate Regionally restricted euxassay_004959_03
Specimen euxassay_004959_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_04
TS23: liver Moderate Regionally restricted euxassay_004959_04
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_04
TS23: maxilla Strong Regionally restricted euxassay_004959_04
TS23: mandible Strong Regionally restricted euxassay_004959_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_04
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_04
Specimen euxassay_004959_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_05
TS23: lung Moderate Regionally restricted euxassay_004959_05
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_05
TS23: mandible Strong Regionally restricted euxassay_004959_05
TS23: maxilla Strong Regionally restricted euxassay_004959_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_05
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_05
Specimen euxassay_004959_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_06
TS23: lung Moderate Regionally restricted euxassay_004959_06
TS23: metanephros Moderate Regionally restricted euxassay_004959_06
TS23: mandible Strong Regionally restricted euxassay_004959_06
TS23: maxilla Strong Regionally restricted euxassay_004959_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_06
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_06
Specimen euxassay_004959_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_07
TS23: lung Moderate Regionally restricted euxassay_004959_07
TS23: metanephros Moderate Regionally restricted euxassay_004959_07
TS23: mandible Strong Regionally restricted euxassay_004959_07
TS23: maxilla Strong Regionally restricted euxassay_004959_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_07
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_07
Specimen euxassay_004959_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_08
TS23: lung Moderate Regionally restricted euxassay_004959_08
TS23: metanephros Moderate Regionally restricted euxassay_004959_08
TS23: mandible Strong Regionally restricted euxassay_004959_08
TS23: maxilla Strong Regionally restricted euxassay_004959_08
TS23: clavicle Strong Regionally restricted euxassay_004959_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_08
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_08
Specimen euxassay_004959_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_004959_09
TS23: liver Moderate Regionally restricted euxassay_004959_09
TS23: lung Moderate Regionally restricted euxassay_004959_09
TS23: mandible Strong Regionally restricted euxassay_004959_09
TS23: maxilla Strong Regionally restricted euxassay_004959_09
TS23: clavicle Strong Regionally restricted euxassay_004959_09
TS23: palatal shelf Strong Regionally restricted euxassay_004959_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_09
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_09
Specimen euxassay_004959_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_10
TS23: lung Moderate Regionally restricted euxassay_004959_10
TS23: mandible Strong Regionally restricted euxassay_004959_10
TS23: maxilla Strong Regionally restricted euxassay_004959_10
TS23: palatal shelf Strong Regionally restricted euxassay_004959_10
TS23: thymus primordium Strong Regionally restricted euxassay_004959_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_10
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_10
Specimen euxassay_004959_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_11
TS23: liver Moderate Regionally restricted euxassay_004959_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_004959_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_004959_11
TS23: mandible Strong Regionally restricted euxassay_004959_11
TS23: maxilla Strong Regionally restricted euxassay_004959_11
TS23: thymus primordium Moderate Regionally restricted euxassay_004959_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_11
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_004959_11
Specimen euxassay_004959_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_12
TS23: liver Moderate Regionally restricted euxassay_004959_12
TS23: thymus primordium Moderate Regionally restricted euxassay_004959_12
TS23: trachea Moderate Regionally restricted euxassay_004959_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_004959_12
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_12
Specimen euxassay_004959_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_13
TS23: liver Moderate Regionally restricted euxassay_004959_13
TS23: thymus primordium Moderate Regionally restricted euxassay_004959_13
TS23: trachea Moderate Regionally restricted euxassay_004959_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_13
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_004959_13
Specimen euxassay_004959_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_14
TS23: liver Moderate Regionally restricted euxassay_004959_14
TS23: mandible Strong Regionally restricted euxassay_004959_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_004959_14
TS23: thymus primordium Moderate Regionally restricted euxassay_004959_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_14
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_14
Specimen euxassay_004959_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_15
TS23: liver Moderate Regionally restricted euxassay_004959_15
TS23: metanephros Moderate Regionally restricted euxassay_004959_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_004959_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_004959_15
TS23: maxilla Strong Regionally restricted euxassay_004959_15
TS23: mandible Strong Regionally restricted euxassay_004959_15
TS23: palatal shelf Strong Regionally restricted euxassay_004959_15
TS23: clavicle Strong Regionally restricted euxassay_004959_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_15
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_15
Specimen euxassay_004959_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_16
TS23: liver Moderate Regionally restricted euxassay_004959_16
TS23: metanephros Moderate Regionally restricted euxassay_004959_16
TS23: maxilla Strong Regionally restricted euxassay_004959_16
TS23: mandible Strong Regionally restricted euxassay_004959_16
TS23: palatal shelf Strong Regionally restricted euxassay_004959_16
TS23: clavicle Strong Regionally restricted euxassay_004959_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_16
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004959_16
Specimen euxassay_004959_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_17
TS23: liver Moderate Regionally restricted euxassay_004959_17
TS23: metanephros Moderate Regionally restricted euxassay_004959_17
TS23: maxilla Strong Regionally restricted euxassay_004959_17
TS23: palatal shelf Strong Regionally restricted euxassay_004959_17
TS23: mandible Strong Regionally restricted euxassay_004959_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_17
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_17
Specimen euxassay_004959_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_18
TS23: liver Moderate Regionally restricted euxassay_004959_18
TS23: metanephros Moderate Regionally restricted euxassay_004959_18
TS23: maxilla Strong Regionally restricted euxassay_004959_18
TS23: mandible Strong Regionally restricted euxassay_004959_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_18
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_18
Specimen euxassay_004959_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_19
TS23: liver Moderate Regionally restricted euxassay_004959_19
TS23: metanephros Moderate Regionally restricted euxassay_004959_19
TS23: mandible Strong Regionally restricted euxassay_004959_19
TS23: maxilla Strong Regionally restricted euxassay_004959_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_19
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_19
Specimen euxassay_004959_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_20
TS23: liver Moderate Regionally restricted euxassay_004959_20
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_20
TS23: mandible Strong Regionally restricted euxassay_004959_20
TS23: maxilla Strong Regionally restricted euxassay_004959_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_004959_20
TS23: 4th ventricle Moderate Regionally restricted euxassay_004959_20
Specimen euxassay_004959_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_21
TS23: liver Moderate Regionally restricted euxassay_004959_21
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_21
TS23: mandible Strong Regionally restricted euxassay_004959_21
TS23: maxilla Strong Regionally restricted euxassay_004959_21
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004959_21
TS23: 4th ventricle Strong Regionally restricted euxassay_004959_21
Specimen euxassay_004959_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_004959_22
TS23: liver Moderate Regionally restricted euxassay_004959_22
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_22
TS23: mandible Strong Regionally restricted euxassay_004959_22
TS23: maxilla Strong Regionally restricted euxassay_004959_22
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004959_22
TS23: retina Moderate Regionally restricted euxassay_004959_22
Specimen euxassay_004959_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_23
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_23
TS23: maxilla Strong Regionally restricted euxassay_004959_23
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004959_23
TS23: retina Moderate Regionally restricted euxassay_004959_23
Specimen euxassay_004959_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004959_24
TS23: orbito-sphenoid Strong Regionally restricted euxassay_004959_24
TS23: maxilla Strong Regionally restricted euxassay_004959_24
TS23: retina Moderate Regionally restricted euxassay_004959_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory