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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824777
Gene symbol: Fap
Gene name: fibroblast activation protein
Probe: IMAGE clone 3157072
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000113_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_01
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_01
TS23: body wall mesenchyme Strong Regionally restricted euxassay_000113_01
TS23: gut Strong Uniform euxassay_000113_01
TS23: gut lumen Present euxassay_000113_01
TS23: foot mesenchyme Strong Regionally restricted euxassay_000113_01
TS23: interdigital region between hindlimb digits 1 and 2 Strong Regionally restricted euxassay_000113_01
TS23: interdigital region between hindlimb digits 2 and 3 Strong Regionally restricted euxassay_000113_01
Specimen euxassay_000113_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lens Strong Uniform euxassay_000113_02
Specimen euxassay_000113_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: peritoneum Moderate Regionally restricted euxassay_000113_03
TS23: pericardial component Moderate Regionally restricted euxassay_000113_03
TS23: orbital fissure Strong Regionally restricted euxassay_000113_03
TS23: optic foramen Strong Regionally restricted euxassay_000113_03
TS23: gut Moderate Regionally restricted euxassay_000113_03
TS23: gut lumen Present euxassay_000113_03
Specimen euxassay_000113_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: gut Strong Regionally restricted euxassay_000113_04
TS23: orbital fissure Strong Regionally restricted euxassay_000113_04
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_04
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000113_04
TS23: trunk mesenchyme Strong Regionally restricted euxassay_000113_04
TS23: body wall mesenchyme Strong Regionally restricted euxassay_000113_04
TS23: pectoral girdle and thoracic body wall muscle Moderate Regionally restricted euxassay_000113_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000113_04
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_000113_04
Specimen euxassay_000113_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: interdigital region between hindlimb digits 1 and 2 Strong Regionally restricted euxassay_000113_05
TS23: interdigital region between hindlimb digits 2 and 3 Strong Regionally restricted euxassay_000113_05
TS23: interdigital region between hindlimb digits 3 and 4 Strong Regionally restricted euxassay_000113_05
TS23: embryo mesenchyme Strong Regionally restricted euxassay_000113_05
TS23: head mesenchyme Strong Regionally restricted euxassay_000113_05
TS23: trunk mesenchyme Strong Regionally restricted euxassay_000113_05
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_05
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_05
TS23: facial bone primordium Strong Regionally restricted euxassay_000113_05
TS23: gut Strong Uniform euxassay_000113_05
TS23: gut lumen Present euxassay_000113_05
TS23: pleuro-pericardial folds Weak Regionally restricted euxassay_000113_05
TS23: anterior abdominal wall musculature Strong Regionally restricted euxassay_000113_05
TS23: pectoral girdle and thoracic body wall musculature Strong Regionally restricted euxassay_000113_05
TS23: pelvic girdle musculature Moderate Regionally restricted euxassay_000113_05
TS23: axial musculature Moderate Regionally restricted euxassay_000113_05
Specimen euxassay_000113_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_06
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_06
TS23: facial bone primordium Moderate Regionally restricted euxassay_000113_06
TS23: gut Strong Uniform euxassay_000113_06
TS23: gut lumen Present euxassay_000113_06
TS23: interdigital region between hindlimb digits 1 and 2 Strong Regionally restricted euxassay_000113_06
TS23: interdigital region between hindlimb digits 2 and 3 Strong Regionally restricted euxassay_000113_06
TS23: interdigital region between hindlimb digits 3 and 4 Strong Regionally restricted euxassay_000113_06
TS23: interdigital region between hindlimb digits 4 and 5 Strong Regionally restricted euxassay_000113_06
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Strong Regionally restricted euxassay_000113_06
TS23: foot mesenchyme Strong Spotted euxassay_000113_06
TS23: pleuro-pericardial folds Weak Regionally restricted euxassay_000113_06
TS23: diaphragm Moderate Regionally restricted euxassay_000113_06
TS23: anterior abdominal wall musculature Strong Regionally restricted euxassay_000113_06
TS23: pectoral girdle and thoracic body wall musculature Strong Regionally restricted euxassay_000113_06
TS23: axial musculature Moderate Regionally restricted euxassay_000113_06
TS23: pelvic girdle musculature Moderate Regionally restricted euxassay_000113_06
Specimen euxassay_000113_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diaphragm Moderate Regionally restricted euxassay_000113_07
TS23: interdigital region between hindlimb digits 2 and 3 Strong Spotted euxassay_000113_07
TS23: interdigital region between hindlimb digits 3 and 4 Strong Spotted euxassay_000113_07
TS23: interdigital region between hindlimb digits 4 and 5 Strong Spotted euxassay_000113_07
TS23: facial bone primordium Strong Regionally restricted euxassay_000113_07
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_07
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_07
TS23: pleura Moderate Regionally restricted euxassay_000113_07
TS23: gut Strong Uniform euxassay_000113_07
TS23: gut lumen Present euxassay_000113_07
TS23: axial musculature Moderate Regionally restricted euxassay_000113_07
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_000113_07
TS23: pelvic girdle musculature Moderate Regionally restricted euxassay_000113_07
Specimen euxassay_000113_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_000113_08
TS23: peritoneum Moderate Regionally restricted euxassay_000113_08
TS23: greater sac mesothelium Moderate Regionally restricted euxassay_000113_08
TS23: omental bursa mesothelium Moderate Regionally restricted euxassay_000113_08
TS23: pelvic girdle musculature Moderate Regionally restricted euxassay_000113_08
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_000113_08
TS23: axial musculature Moderate Regionally restricted euxassay_000113_08
TS23: gut Strong Uniform euxassay_000113_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_000113_08
TS23: pleura Moderate Regionally restricted euxassay_000113_08
Specimen euxassay_000113_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Moderate Regionally restricted euxassay_000113_09
TS23: trunk mesenchyme Moderate Regionally restricted euxassay_000113_09
TS23: head mesenchyme Moderate Regionally restricted euxassay_000113_09
TS23: axial musculature Moderate Regionally restricted euxassay_000113_09
TS23: anterior abdominal wall musculature Moderate Regionally restricted euxassay_000113_09
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_000113_09
TS23: pelvic girdle musculature Moderate Regionally restricted euxassay_000113_09
TS23: gut Strong Uniform euxassay_000113_09
TS23: intestine mesenchyme Present euxassay_000113_09
TS23: axial skeleton Strong Uniform euxassay_000113_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000113_09
TS23: submandibular gland primordium mesenchyme Strong Uniform euxassay_000113_09
Specimen euxassay_000113_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium mesenchyme Strong Uniform euxassay_000113_10
TS23: axial skeleton Strong Regionally restricted euxassay_000113_10
TS23: intervertebral disc Present euxassay_000113_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_10
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_10
TS23: gut Strong Regionally restricted euxassay_000113_10
Specimen euxassay_000113_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_000113_11
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_11
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_11
TS23: axial skeleton Strong Uniform euxassay_000113_11
TS23: intervertebral disc Present euxassay_000113_11
TS23: visceral pleura Moderate Uniform euxassay_000113_11
TS23: parietal pleura Moderate Uniform euxassay_000113_11
TS23: body wall mesenchyme Moderate Regionally restricted euxassay_000113_11
Specimen euxassay_000113_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: visceral pleura Moderate Uniform euxassay_000113_12
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_12
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_12
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_12
TS23: nasal cavity epithelium Strong Regionally restricted euxassay_000113_12
TS23: nasal cavity Strong Regionally restricted euxassay_000113_12
Specimen euxassay_000113_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: nasal capsule Strong Regionally restricted euxassay_000113_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_000113_13
TS23: axial skeleton Strong Uniform euxassay_000113_13
TS23: intervertebral disc Present euxassay_000113_13
TS23: brain Strong Regionally restricted euxassay_000113_13
TS23: choroid plexus Present euxassay_000113_13
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_13
TS23: sublingual gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_13
Specimen euxassay_000113_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: central nervous system Strong Regionally restricted euxassay_000113_14
TS23: choroid plexus Present euxassay_000113_14
TS23: brain Strong Regionally restricted euxassay_000113_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_000113_14
TS23: sublingual gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_14
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_14
TS23: turbinate bone primordium Weak Regionally restricted euxassay_000113_14
Specimen euxassay_000113_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_000113_15
TS23: choroid plexus Present euxassay_000113_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_000113_15
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_000113_15
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_000113_15 lumen
TS23: sublingual gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_15
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_15
TS23: palatal shelf mesenchyme Strong Regionally restricted euxassay_000113_15
TS23: greater sac visceral mesothelium Moderate Regionally restricted euxassay_000113_15
TS23: nasal septum Strong Uniform euxassay_000113_15
Specimen euxassay_000113_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial skeleton Strong Uniform euxassay_000113_16
TS23: intervertebral disc Present euxassay_000113_16
TS23: nasal septum Strong Uniform euxassay_000113_16
TS23: nasal septum mesenchyme Strong Uniform euxassay_000113_16
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_16
TS23: sublingual gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_16
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_000113_16
TS23: tail paraxial mesenchyme Moderate Uniform euxassay_000113_16
TS23: brain Strong Uniform euxassay_000113_16
TS23: choroid plexus Present euxassay_000113_16
Specimen euxassay_000113_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: brain Strong Uniform euxassay_000113_17
TS23: choroid plexus Present euxassay_000113_17
TS23: nasal septum Strong Uniform euxassay_000113_17 mesenchyme
TS23: nasal cavity Strong Uniform euxassay_000113_17 mesenchyme
TS23: tail paraxial mesenchyme Strong Regionally restricted euxassay_000113_17
TS23: axial skeleton Strong Uniform euxassay_000113_17
TS23: intervertebral disc Present euxassay_000113_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000113_17
TS23: omental bursa mesothelium Moderate Uniform euxassay_000113_17
TS23: greater sac mesothelium Moderate Uniform euxassay_000113_17
Specimen euxassay_000113_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_000113_18
TS23: viscerocranium Strong Uniform euxassay_000113_18
TS23: turbinate bone primordium Strong Uniform euxassay_000113_18
TS23: orbito-sphenoid Strong Uniform euxassay_000113_18
TS23: axial skeleton Strong Uniform euxassay_000113_18
TS23: intervertebral disc Present euxassay_000113_18
TS23: sublingual gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_18
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_18
TS23: omental bursa parietal mesothelium Moderate Uniform euxassay_000113_18
TS23: greater sac mesothelium Moderate Uniform euxassay_000113_18
TS23: physiological umbilical hernia Strong Uniform euxassay_000113_18
TS23: physiological umbilical hernia dermis Strong Uniform euxassay_000113_18
Specimen euxassay_000113_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: omental bursa parietal mesothelium Moderate Uniform euxassay_000113_19
TS23: greater sac mesothelium Moderate Uniform euxassay_000113_19
TS23: greater sac parietal mesothelium Moderate Uniform euxassay_000113_19
TS23: greater sac visceral mesothelium Moderate Uniform euxassay_000113_19
TS23: submandibular gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_19
TS23: sublingual gland primordium mesenchyme Moderate Regionally restricted euxassay_000113_19
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_19
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_19
TS23: axial skeleton tail region Strong Uniform euxassay_000113_19
TS23: intervertebral disc Present euxassay_000113_19
TS23: embryo mesenchyme Strong Regionally restricted euxassay_000113_19
Specimen euxassay_000113_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: sublingual gland primordium mesenchyme Strong Regionally restricted euxassay_000113_20
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_000113_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000113_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_000113_20
TS23: axial skeleton Strong Uniform euxassay_000113_20
TS23: intervertebral disc Present euxassay_000113_20
TS23: physiological umbilical hernia Strong Regionally restricted euxassay_000113_20
TS23: greater sac visceral mesothelium Moderate Uniform euxassay_000113_20
TS23: greater sac parietal mesothelium Moderate Uniform euxassay_000113_20
TS23: omental bursa parietal mesothelium Moderate Uniform euxassay_000113_20
TS23: diaphragm mesothelium Moderate Uniform euxassay_000113_20
Specimen euxassay_000113_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: greater sac visceral mesothelium Moderate Uniform euxassay_000113_21
TS23: greater sac parietal mesothelium Moderate Uniform euxassay_000113_21
TS23: omental bursa parietal mesothelium Moderate Uniform euxassay_000113_21
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_000113_21
TS23: sublingual gland primordium mesenchyme Strong Regionally restricted euxassay_000113_21
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_000113_21
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_21
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_21
Specimen euxassay_000113_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_22
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_22
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_000113_22
TS23: sublingual gland primordium mesenchyme Strong Regionally restricted euxassay_000113_22
TS23: body wall mesenchyme Moderate Uniform euxassay_000113_22
TS23: omental bursa parietal mesothelium Moderate Uniform euxassay_000113_22
TS23: greater sac visceral mesothelium Moderate Uniform euxassay_000113_22
TS23: greater sac parietal mesothelium Moderate Uniform euxassay_000113_22
Specimen euxassay_000113_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: greater sac visceral mesothelium Strong Regionally restricted euxassay_000113_23
TS23: omental bursa parietal mesothelium Strong Regionally restricted euxassay_000113_23
TS23: body wall mesenchyme Moderate Uniform euxassay_000113_23
TS23: lower jaw mesenchyme Strong Regionally restricted euxassay_000113_23
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_23
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_23
TS23: greater sac parietal mesothelium Strong Regionally restricted euxassay_000113_23
Specimen euxassay_000113_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Moderate Regionally restricted euxassay_000113_24
TS23: greater sac parietal mesothelium Moderate Regionally restricted euxassay_000113_24
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000113_24
TS23: orbito-sphenoid Strong Regionally restricted euxassay_000113_24
TS23: orbital fissure Strong Regionally restricted euxassay_000113_24
TS23: facial bone primordium Strong Regionally restricted euxassay_000113_24
TS23: ethmoid bone primordium Strong Regionally restricted euxassay_000113_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory