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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824695
Gene symbol: Tcaf2
Gene name: TRPM8 channel-associated factor 2
Probe: MGC clone 7793
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003455_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_003455_01
TS23: stomach Moderate Regionally restricted euxassay_003455_01
TS23: forelimb Weak Regionally restricted euxassay_003455_01
Specimen euxassay_003455_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_003455_02
TS23: stomach Moderate Regionally restricted euxassay_003455_02
Specimen euxassay_003455_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_003455_03
TS23: vibrissa Moderate Regionally restricted euxassay_003455_03
TS23: stomach Moderate Regionally restricted euxassay_003455_03
Specimen euxassay_003455_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_003455_04
TS23: vibrissa Moderate Regionally restricted euxassay_003455_04
TS23: stomach Moderate Regionally restricted euxassay_003455_04
TS23: lung Moderate Regionally restricted euxassay_003455_04
TS23: midgut Moderate Regionally restricted euxassay_003455_04
TS23: hindlimb Moderate Regionally restricted euxassay_003455_04
Specimen euxassay_003455_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_003455_05
TS23: stomach Moderate Regionally restricted euxassay_003455_05
TS23: lung Moderate Regionally restricted euxassay_003455_05
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_05
TS23: midgut Moderate Regionally restricted euxassay_003455_05
TS23: hindlimb Moderate Regionally restricted euxassay_003455_05
Specimen euxassay_003455_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_003455_06
TS23: lung Moderate Regionally restricted euxassay_003455_06
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_06
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_06
TS23: midgut Moderate Regionally restricted euxassay_003455_06
Specimen euxassay_003455_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_003455_07
TS23: lung Weak Regionally restricted euxassay_003455_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_07
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_07
TS23: midgut Weak Regionally restricted euxassay_003455_07
Specimen euxassay_003455_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_08
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_08
TS23: midgut Weak Regionally restricted euxassay_003455_08
TS23: metanephros Moderate Single cells euxassay_003455_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_08
Specimen euxassay_003455_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_09
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_09
TS23: midgut Weak Regionally restricted euxassay_003455_09
TS23: metanephros Moderate Single cells euxassay_003455_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_003455_09 facial motor nucleus
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_09
Specimen euxassay_003455_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_10
TS23: midgut Weak Regionally restricted euxassay_003455_10
TS23: metanephros Weak Single cells euxassay_003455_10
Specimen euxassay_003455_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_11
TS23: tongue Moderate Regionally restricted euxassay_003455_11
TS23: midgut Weak Regionally restricted euxassay_003455_11
TS23: metanephros Weak Single cells euxassay_003455_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_11
Specimen euxassay_003455_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_12
TS23: tongue Moderate Regionally restricted euxassay_003455_12
TS23: thymus primordium Moderate Regionally restricted euxassay_003455_12
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003455_12
TS23: midgut Moderate Regionally restricted euxassay_003455_12
TS23: bladder Moderate Regionally restricted euxassay_003455_12
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_003455_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_12
Specimen euxassay_003455_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_13
TS23: tongue Moderate Regionally restricted euxassay_003455_13
TS23: thymus primordium Moderate Regionally restricted euxassay_003455_13
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003455_13
TS23: midgut Moderate Regionally restricted euxassay_003455_13
TS23: bladder Moderate Regionally restricted euxassay_003455_13
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_003455_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_13
Specimen euxassay_003455_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_14
TS23: tongue Moderate Regionally restricted euxassay_003455_14
TS23: thymus primordium Moderate Regionally restricted euxassay_003455_14
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003455_14
TS23: midgut Moderate Regionally restricted euxassay_003455_14
TS23: bladder Moderate Regionally restricted euxassay_003455_14
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_003455_14
Specimen euxassay_003455_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_15
TS23: tongue Moderate Regionally restricted euxassay_003455_15
TS23: thymus primordium Moderate Regionally restricted euxassay_003455_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003455_15
TS23: nasal cavity respiratory epithelium Weak Regionally restricted euxassay_003455_15
TS23: midgut Moderate Regionally restricted euxassay_003455_15
TS23: bladder Weak Regionally restricted euxassay_003455_15
TS23: spinal cord lateral wall Weak Regionally restricted euxassay_003455_15
Specimen euxassay_003455_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_16
TS23: tongue Moderate Regionally restricted euxassay_003455_16
TS23: thymus primordium Moderate Regionally restricted euxassay_003455_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003455_16
TS23: nasal cavity respiratory epithelium Weak Regionally restricted euxassay_003455_16
TS23: midgut Moderate Regionally restricted euxassay_003455_16
TS23: spinal cord lateral wall Weak Regionally restricted euxassay_003455_16
Specimen euxassay_003455_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_17
TS23: tongue Moderate Regionally restricted euxassay_003455_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003455_17
TS23: midgut Moderate Regionally restricted euxassay_003455_17
TS23: metanephros Weak Single cells euxassay_003455_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_003455_17 facial motor nucleus
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_17
Specimen euxassay_003455_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_003455_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_18
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_18
TS23: midgut Moderate Regionally restricted euxassay_003455_18
TS23: metanephros Weak Single cells euxassay_003455_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_18
Specimen euxassay_003455_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_003455_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_19
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_19
TS23: metanephros Weak Single cells euxassay_003455_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003455_19
Specimen euxassay_003455_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_003455_20
TS23: gland Moderate Regionally restricted euxassay_003455_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003455_20
TS23: oral epithelium Moderate Regionally restricted euxassay_003455_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_003455_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_003455_20
TS23: metanephros Weak Single cells euxassay_003455_20
Specimen euxassay_003455_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_003455_21
TS23: lung Weak Regionally restricted euxassay_003455_21
TS23: hindlimb Weak Regionally restricted euxassay_003455_21
Specimen euxassay_003455_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_003455_22
TS23: lung Weak Regionally restricted euxassay_003455_22
TS23: forelimb Weak Regionally restricted euxassay_003455_22
Specimen euxassay_003455_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_003455_23
TS23: lung Moderate Regionally restricted euxassay_003455_23
TS23: hindlimb Weak Regionally restricted euxassay_003455_23
TS23: forelimb Weak Regionally restricted euxassay_003455_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory