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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824694
Gene symbol: Tcaf1
Gene name: TRPM8 channel-associated factor 1
Probe: T31185
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010625_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_02
TS23: brain Moderate Uniform euxassay_010625_02
Specimen euxassay_010625_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_03
TS23: brain Moderate Uniform euxassay_010625_03
Specimen euxassay_010625_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_04
TS23: facial ganglion Strong Regionally restricted euxassay_010625_04
TS23: brain Moderate Uniform euxassay_010625_04
Specimen euxassay_010625_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_05
TS23: facial ganglion Strong Regionally restricted euxassay_010625_05
TS23: brain Moderate Uniform euxassay_010625_05
Specimen euxassay_010625_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010625_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010625_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_06
TS23: facial ganglion Strong Regionally restricted euxassay_010625_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_06
TS23: brain Moderate Uniform euxassay_010625_06
Specimen euxassay_010625_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010625_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010625_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_07
TS23: brain Moderate Uniform euxassay_010625_07
Specimen euxassay_010625_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_08
TS23: brain Moderate Uniform euxassay_010625_08
TS23: spinal cord Moderate Uniform euxassay_010625_08
Specimen euxassay_010625_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_010625_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_09
TS23: brain Moderate Uniform euxassay_010625_09
TS23: spinal cord Moderate Uniform euxassay_010625_09
Specimen euxassay_010625_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010625_10
TS23: spinal cord Moderate Uniform euxassay_010625_10
TS23: brain Moderate Uniform euxassay_010625_10
Specimen euxassay_010625_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010625_11
TS23: spinal cord Moderate Uniform euxassay_010625_11
TS23: brain Moderate Uniform euxassay_010625_11
Specimen euxassay_010625_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_010625_12
TS23: brain Moderate Uniform euxassay_010625_12
Specimen euxassay_010625_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_010625_13
TS23: brain Moderate Uniform euxassay_010625_13
Specimen euxassay_010625_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010625_14
TS23: spinal cord Moderate Uniform euxassay_010625_14
TS23: brain Moderate Uniform euxassay_010625_14
Specimen euxassay_010625_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_15
TS23: spinal cord Moderate Uniform euxassay_010625_15
TS23: brain Moderate Uniform euxassay_010625_15
Specimen euxassay_010625_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010625_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010625_16
TS23: brain Moderate Uniform euxassay_010625_16
Specimen euxassay_010625_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_17
TS23: facial ganglion Strong Regionally restricted euxassay_010625_17
TS23: brain Moderate Uniform euxassay_010625_17
Specimen euxassay_010625_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_18
TS23: facial ganglion Strong Regionally restricted euxassay_010625_18
TS23: brain Moderate Uniform euxassay_010625_18
Specimen euxassay_010625_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_19
TS23: brain Moderate Uniform euxassay_010625_19
Specimen euxassay_010625_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_20
TS23: brain Moderate Uniform euxassay_010625_20
Specimen euxassay_010625_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_21
TS23: brain Moderate Uniform euxassay_010625_21
Specimen euxassay_010625_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_22
TS23: brain Moderate Uniform euxassay_010625_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory