About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824694
Gene symbol: Tcaf1
Gene name: TRPM8 channel-associated factor 1
Probe: T31185
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010625_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_02
TS23: brain Moderate Uniform euxassay_010625_02
Specimen euxassay_010625_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_03
TS23: brain Moderate Uniform euxassay_010625_03
Specimen euxassay_010625_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_04
TS23: facial ganglion Strong Regionally restricted euxassay_010625_04
TS23: brain Moderate Uniform euxassay_010625_04
Specimen euxassay_010625_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_05
TS23: facial ganglion Strong Regionally restricted euxassay_010625_05
TS23: brain Moderate Uniform euxassay_010625_05
Specimen euxassay_010625_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010625_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010625_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_06
TS23: facial ganglion Strong Regionally restricted euxassay_010625_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_06
TS23: brain Moderate Uniform euxassay_010625_06
Specimen euxassay_010625_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010625_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010625_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_07
TS23: brain Moderate Uniform euxassay_010625_07
Specimen euxassay_010625_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_08
TS23: brain Moderate Uniform euxassay_010625_08
TS23: spinal cord Moderate Uniform euxassay_010625_08
Specimen euxassay_010625_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_010625_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_09
TS23: brain Moderate Uniform euxassay_010625_09
TS23: spinal cord Moderate Uniform euxassay_010625_09
Specimen euxassay_010625_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010625_10
TS23: spinal cord Moderate Uniform euxassay_010625_10
TS23: brain Moderate Uniform euxassay_010625_10
Specimen euxassay_010625_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010625_11
TS23: spinal cord Moderate Uniform euxassay_010625_11
TS23: brain Moderate Uniform euxassay_010625_11
Specimen euxassay_010625_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_010625_12
TS23: brain Moderate Uniform euxassay_010625_12
Specimen euxassay_010625_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_010625_13
TS23: brain Moderate Uniform euxassay_010625_13
Specimen euxassay_010625_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010625_14
TS23: spinal cord Moderate Uniform euxassay_010625_14
TS23: brain Moderate Uniform euxassay_010625_14
Specimen euxassay_010625_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010625_15
TS23: spinal cord Moderate Uniform euxassay_010625_15
TS23: brain Moderate Uniform euxassay_010625_15
Specimen euxassay_010625_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010625_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010625_16
TS23: brain Moderate Uniform euxassay_010625_16
Specimen euxassay_010625_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_17
TS23: facial ganglion Strong Regionally restricted euxassay_010625_17
TS23: brain Moderate Uniform euxassay_010625_17
Specimen euxassay_010625_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_18
TS23: facial ganglion Strong Regionally restricted euxassay_010625_18
TS23: brain Moderate Uniform euxassay_010625_18
Specimen euxassay_010625_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_19
TS23: brain Moderate Uniform euxassay_010625_19
Specimen euxassay_010625_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_20
TS23: brain Moderate Uniform euxassay_010625_20
Specimen euxassay_010625_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010625_21
TS23: brain Moderate Uniform euxassay_010625_21
Specimen euxassay_010625_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010625_22
TS23: brain Moderate Uniform euxassay_010625_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory