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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824458
Gene symbol: Ebf3
Gene name: early B cell factor 3
Probe: IMAGE clone 1511771
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005263_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_01
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_01
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_01
TS23: lung Moderate Regionally restricted euxassay_005263_01
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_01
Specimen euxassay_005263_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_02
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_02
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_02
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_02
TS23: hand Moderate Regionally restricted euxassay_005263_02
TS23: lung Weak Regionally restricted euxassay_005263_02
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_02
Specimen euxassay_005263_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_03
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_03
TS23: midbrain mantle layer Strong Uniform euxassay_005263_03
TS23: telencephalon meninges Strong Regionally restricted euxassay_005263_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_03
TS23: hand Moderate Regionally restricted euxassay_005263_03
TS23: lung Weak Regionally restricted euxassay_005263_03
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_03
Specimen euxassay_005263_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Uniform euxassay_005263_04
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_04
TS23: pons mantle layer Strong Uniform euxassay_005263_04
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_04
TS23: hand Moderate Regionally restricted euxassay_005263_04
TS23: foot Moderate Regionally restricted euxassay_005263_04
TS23: lung Weak Regionally restricted euxassay_005263_04
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_04
Specimen euxassay_005263_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_005263_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_05
TS23: pons mantle layer Strong Uniform euxassay_005263_05
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_05
TS23: midbrain mantle layer Strong Uniform euxassay_005263_05
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_05
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_05
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_05
TS23: trigeminal nerve Moderate Regionally restricted euxassay_005263_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_05
TS23: foot Moderate Regionally restricted euxassay_005263_05
TS23: lung Weak Regionally restricted euxassay_005263_05
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_05
Specimen euxassay_005263_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_005263_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_06
TS23: midbrain mantle layer Strong Uniform euxassay_005263_06
TS23: pons mantle layer Strong Uniform euxassay_005263_06
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_06
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_06
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_06
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_06
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_06
TS23: trigeminal nerve Moderate Regionally restricted euxassay_005263_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_06
TS23: foot Moderate Regionally restricted euxassay_005263_06
TS23: lung Weak Regionally restricted euxassay_005263_06
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_06
Specimen euxassay_005263_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_005263_07
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005263_07
TS23: midbrain mantle layer Strong Uniform euxassay_005263_07
TS23: pons mantle layer Strong Uniform euxassay_005263_07
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_07
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_07
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_07
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_07
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_07
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_07
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_07
TS23: sternum Moderate Regionally restricted euxassay_005263_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_07
TS23: trigeminal nerve Moderate Regionally restricted euxassay_005263_07
TS23: foot Moderate Regionally restricted euxassay_005263_07
TS23: lung Weak Regionally restricted euxassay_005263_07
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_07
Specimen euxassay_005263_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_08
TS23: midbrain mantle layer Strong Uniform euxassay_005263_08
TS23: pons mantle layer Strong Uniform euxassay_005263_08
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_08
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_08
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_08
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_08
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_08
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_08
TS23: sternum Moderate Regionally restricted euxassay_005263_08
TS23: lung Weak Regionally restricted euxassay_005263_08
Specimen euxassay_005263_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_09
TS23: midbrain mantle layer Strong Uniform euxassay_005263_09
TS23: pons mantle layer Strong Uniform euxassay_005263_09
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_09
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_09
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_09
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_09
TS23: sternum Moderate Regionally restricted euxassay_005263_09
TS23: lung Weak Regionally restricted euxassay_005263_09
Specimen euxassay_005263_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_10
TS23: midbrain mantle layer Strong Uniform euxassay_005263_10
TS23: pons mantle layer Strong Uniform euxassay_005263_10
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_10
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_10
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_10
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_10
TS23: sternum Moderate Regionally restricted euxassay_005263_10
TS23: lung Weak Regionally restricted euxassay_005263_10
Specimen euxassay_005263_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_11
TS23: vomeronasal organ Strong Regionally restricted euxassay_005263_11
TS23: midbrain mantle layer Strong Uniform euxassay_005263_11
TS23: pons mantle layer Strong Uniform euxassay_005263_11
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_11
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_11
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_11
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_11
TS23: sternum Moderate Regionally restricted euxassay_005263_11
TS23: lung Weak Regionally restricted euxassay_005263_11
TS23: tongue muscle Weak Regionally restricted euxassay_005263_11
Specimen euxassay_005263_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Uniform euxassay_005263_12
TS23: pons mantle layer Strong Uniform euxassay_005263_12
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_12
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_12
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_12
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_12
TS23: lung Weak Regionally restricted euxassay_005263_12
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_12
TS23: tongue muscle Weak Regionally restricted euxassay_005263_12
Specimen euxassay_005263_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_13
TS23: midbrain mantle layer Strong Uniform euxassay_005263_13
TS23: pons mantle layer Strong Uniform euxassay_005263_13
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_13
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_13
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_13
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_13
TS23: sternum Moderate Regionally restricted euxassay_005263_13
TS23: lung Weak Regionally restricted euxassay_005263_13
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_13
TS23: tongue muscle Weak Regionally restricted euxassay_005263_13
Specimen euxassay_005263_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_14
TS23: vomeronasal organ Strong Regionally restricted euxassay_005263_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_14
TS23: midbrain mantle layer Strong Uniform euxassay_005263_14
TS23: pons mantle layer Strong Uniform euxassay_005263_14
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_14
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_14
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_14
TS23: spinal cord mantle layer Strong Uniform euxassay_005263_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005263_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_005263_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_14
TS23: sternum Moderate Regionally restricted euxassay_005263_14
TS23: lung Weak Regionally restricted euxassay_005263_14
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_14
TS23: tongue muscle Weak Regionally restricted euxassay_005263_14
Specimen euxassay_005263_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005263_15
TS23: midbrain mantle layer Strong Uniform euxassay_005263_15
TS23: pons mantle layer Strong Uniform euxassay_005263_15
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_15
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_005263_15
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_005263_15
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_15
TS23: sternum Moderate Regionally restricted euxassay_005263_15
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_15
TS23: lung Weak Regionally restricted euxassay_005263_15
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_15
Specimen euxassay_005263_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_16
TS23: midbrain mantle layer Strong Uniform euxassay_005263_16
TS23: pons mantle layer Strong Uniform euxassay_005263_16
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_16
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_16
TS23: lung Weak Regionally restricted euxassay_005263_16
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_16
Specimen euxassay_005263_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_005263_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_005263_17
TS23: pons mantle layer Strong Uniform euxassay_005263_17
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_17
TS23: lung Weak Regionally restricted euxassay_005263_17
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_17
Specimen euxassay_005263_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_005263_18
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_18
TS23: trigeminal nerve Moderate Regionally restricted euxassay_005263_18
TS23: foot Moderate Regionally restricted euxassay_005263_18
TS23: lung Weak Regionally restricted euxassay_005263_18
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_18
Specimen euxassay_005263_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_005263_19
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_005263_19
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005263_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_19
TS23: foot Moderate Regionally restricted euxassay_005263_19
TS23: lung Weak Regionally restricted euxassay_005263_19
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_19
Specimen euxassay_005263_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_20
TS23: vibrissa Strong Regionally restricted euxassay_005263_20
TS23: telencephalon meninges Strong Regionally restricted euxassay_005263_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005263_20
TS23: foot Moderate Regionally restricted euxassay_005263_20
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005263_20
TS23: lung Weak Regionally restricted euxassay_005263_20
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_20
Specimen euxassay_005263_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_21
TS23: telencephalon meninges Strong Regionally restricted euxassay_005263_21
TS23: foot Moderate Regionally restricted euxassay_005263_21
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005263_21
TS23: lung Weak Regionally restricted euxassay_005263_21
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_21
Specimen euxassay_005263_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_22
TS23: telencephalon meninges Strong Regionally restricted euxassay_005263_22
TS23: hand Moderate Regionally restricted euxassay_005263_22
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005263_22
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_22
Specimen euxassay_005263_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_005263_23
TS23: hand Moderate Regionally restricted euxassay_005263_23
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005263_23
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_005263_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory