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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824428
Gene symbol: Dync1i1
Gene name: dynein cytoplasmic 1 intermediate chain 1
Probe: IMAGE clone 1480265
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006183_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_01
TS23: diaphragm Strong Spotted euxassay_006183_01
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_01
TS23: hand Moderate Spotted euxassay_006183_01
TS23: upper arm muscle Moderate Spotted euxassay_006183_01
TS23: forearm rest of mesenchyme Moderate Spotted euxassay_006183_01
TS23: foot Moderate Spotted euxassay_006183_01
Specimen euxassay_006183_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_02
TS23: diaphragm Strong Spotted euxassay_006183_02
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_02
TS23: upper arm muscle Moderate Spotted euxassay_006183_02
TS23: hand Moderate Spotted euxassay_006183_02
TS23: lower leg rest of mesenchyme Moderate Spotted euxassay_006183_02
Specimen euxassay_006183_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_03
TS23: vertebral axis musculature Strong Spotted euxassay_006183_03
TS23: trigeminal ganglion Strong Spotted euxassay_006183_03
TS23: facial ganglion Strong Spotted euxassay_006183_03
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_03
TS23: hand Moderate Spotted euxassay_006183_03
TS23: upper arm muscle Moderate Spotted euxassay_006183_03
TS23: lower leg rest of mesenchyme Weak Spotted euxassay_006183_03
Specimen euxassay_006183_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_04
TS23: vertebral axis musculature Strong Spotted euxassay_006183_04
TS23: trigeminal ganglion Strong Spotted euxassay_006183_04
TS23: facial ganglion Strong Spotted euxassay_006183_04
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_04
TS23: hand Moderate Spotted euxassay_006183_04
TS23: upper arm muscle Moderate Spotted euxassay_006183_04
TS23: lower leg rest of mesenchyme Moderate Spotted euxassay_006183_04
Specimen euxassay_006183_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_05
TS23: vertebral axis musculature Strong Spotted euxassay_006183_05
TS23: trigeminal ganglion Strong Spotted euxassay_006183_05
TS23: facial ganglion Strong Spotted euxassay_006183_05
TS23: dorsal root ganglion Strong Spotted euxassay_006183_05
TS23: ovary Moderate Regionally restricted euxassay_006183_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_05
TS23: midbrain mantle layer Moderate Single cells euxassay_006183_05
TS23: pons mantle layer Weak Regionally restricted euxassay_006183_05
TS23: hand Moderate Spotted euxassay_006183_05
TS23: upper arm muscle Moderate Spotted euxassay_006183_05
TS23: lower leg rest of mesenchyme Strong Spotted euxassay_006183_05
TS23: upper leg muscle Strong Spotted euxassay_006183_05
Specimen euxassay_006183_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_06
TS23: vertebral axis musculature Strong Spotted euxassay_006183_06
TS23: trigeminal ganglion Strong Spotted euxassay_006183_06
TS23: glossopharyngeal ganglion Strong Spotted euxassay_006183_06
TS23: vestibulo-cochlear ganglion Strong Spotted euxassay_006183_06
TS23: vagus ganglion Strong Spotted euxassay_006183_06
TS23: dorsal root ganglion Strong Spotted euxassay_006183_06
TS23: renal cortex Moderate Regionally restricted euxassay_006183_06
TS23: adrenal gland Moderate Regionally restricted euxassay_006183_06
TS23: ovary Moderate Regionally restricted euxassay_006183_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_06
TS23: midbrain mantle layer Moderate Single cells euxassay_006183_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006183_06
TS23: upper leg muscle Strong Spotted euxassay_006183_06
TS23: lower leg rest of mesenchyme Strong Spotted euxassay_006183_06
TS23: foot Strong Spotted euxassay_006183_06
Specimen euxassay_006183_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_07
TS23: vertebral axis musculature Strong Spotted euxassay_006183_07
TS23: trigeminal ganglion Strong Spotted euxassay_006183_07
TS23: vagus ganglion Strong Spotted euxassay_006183_07
TS23: dorsal root ganglion Strong Spotted euxassay_006183_07
TS23: renal cortex Moderate Regionally restricted euxassay_006183_07
TS23: adrenal gland Moderate Regionally restricted euxassay_006183_07
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_07
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006183_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006183_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_07
TS23: upper leg muscle Strong Spotted euxassay_006183_07
TS23: foot Moderate Spotted euxassay_006183_07
Specimen euxassay_006183_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_08
TS23: vertebral axis musculature Strong Spotted euxassay_006183_08
TS23: trigeminal ganglion Strong Spotted euxassay_006183_08
TS23: dorsal root ganglion Strong Spotted euxassay_006183_08
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_08
TS23: renal cortex Moderate Regionally restricted euxassay_006183_08
TS23: adrenal gland Moderate Regionally restricted euxassay_006183_08
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_08
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006183_08
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_006183_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006183_08
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006183_08
TS23: upper leg muscle Strong Spotted euxassay_006183_08
Specimen euxassay_006183_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_09
TS23: vertebral axis musculature Strong Spotted euxassay_006183_09
TS23: dorsal root ganglion Strong Spotted euxassay_006183_09
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_09
TS23: renal cortex Moderate Regionally restricted euxassay_006183_09
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_09
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006183_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006183_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006183_09
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006183_09
TS23: upper leg muscle Strong Spotted euxassay_006183_09
Specimen euxassay_006183_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Moderate Spotted euxassay_006183_10
TS23: vertebral axis musculature Strong Spotted euxassay_006183_10
TS23: dorsal root ganglion Strong Spotted euxassay_006183_10
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_10
TS23: tongue muscle Strong Spotted euxassay_006183_10
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_006183_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006183_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_10
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006183_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006183_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006183_10
TS23: upper leg muscle Strong Spotted euxassay_006183_10
Specimen euxassay_006183_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_11
TS23: vertebral axis musculature Strong Spotted euxassay_006183_11
TS23: dorsal root ganglion Strong Spotted euxassay_006183_11
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_11
TS23: tongue muscle Strong Spotted euxassay_006183_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_006183_11
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006183_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_11
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006183_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006183_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006183_11
Specimen euxassay_006183_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_12
TS23: vertebral axis musculature Strong Spotted euxassay_006183_12
TS23: dorsal root ganglion Strong Spotted euxassay_006183_12
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_12
TS23: tongue muscle Strong Spotted euxassay_006183_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_006183_12
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006183_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_12
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006183_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006183_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006183_12
Specimen euxassay_006183_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Spotted euxassay_006183_13
TS23: vertebral axis musculature Strong Spotted euxassay_006183_13
TS23: dorsal root ganglion Strong Spotted euxassay_006183_13
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_13
TS23: tongue muscle Strong Spotted euxassay_006183_13
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006183_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_13
TS23: midbrain tegmentum Moderate Single cells euxassay_006183_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006183_13
Specimen euxassay_006183_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Moderate Spotted euxassay_006183_14
TS23: vertebral axis musculature Strong Spotted euxassay_006183_14
TS23: dorsal root ganglion Strong Spotted euxassay_006183_14
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_14
TS23: tongue muscle Strong Spotted euxassay_006183_14
TS23: renal cortex Moderate Regionally restricted euxassay_006183_14
TS23: adrenal gland Moderate Regionally restricted euxassay_006183_14
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006183_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_14
TS23: midbrain mantle layer Moderate Single cells euxassay_006183_14
TS23: midbrain tegmentum Moderate Single cells euxassay_006183_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006183_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_14
Specimen euxassay_006183_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Moderate Spotted euxassay_006183_15
TS23: vertebral axis musculature Strong Spotted euxassay_006183_15
TS23: vagus ganglion Strong Spotted euxassay_006183_15
TS23: vestibulo-cochlear ganglion Moderate Spotted euxassay_006183_15
TS23: dorsal root ganglion Strong Spotted euxassay_006183_15
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_15
TS23: tongue muscle Strong Spotted euxassay_006183_15
TS23: adrenal gland Moderate Regionally restricted euxassay_006183_15
TS23: renal cortex Moderate Regionally restricted euxassay_006183_15
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_15
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_006183_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_15
TS23: midbrain mantle layer Moderate Single cells euxassay_006183_15
TS23: midbrain tegmentum Moderate Single cells euxassay_006183_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006183_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_15
Specimen euxassay_006183_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Moderate Spotted euxassay_006183_16
TS23: vertebral axis musculature Strong Spotted euxassay_006183_16
TS23: vestibulo-cochlear ganglion Strong Spotted euxassay_006183_16
TS23: vagus ganglion Strong Spotted euxassay_006183_16
TS23: trigeminal ganglion Strong Spotted euxassay_006183_16
TS23: glossopharyngeal ganglion Strong Spotted euxassay_006183_16
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_16
TS23: renal cortex Moderate Regionally restricted euxassay_006183_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_006183_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006183_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006183_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006183_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_006183_16
Specimen euxassay_006183_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Moderate Spotted euxassay_006183_17
TS23: vertebral axis musculature Strong Spotted euxassay_006183_17
TS23: trigeminal ganglion Strong Spotted euxassay_006183_17
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_17
TS23: renal cortex Moderate Regionally restricted euxassay_006183_17
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_006183_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_17
TS23: pons mantle layer Weak Regionally restricted euxassay_006183_17
Specimen euxassay_006183_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_18
TS23: diaphragm Weak Spotted euxassay_006183_18
TS23: trigeminal ganglion Strong Spotted euxassay_006183_18
TS23: facial ganglion Strong Spotted euxassay_006183_18
TS23: tail paraxial mesenchyme Strong Spotted euxassay_006183_18
TS23: ovary Moderate Regionally restricted euxassay_006183_18
TS23: renal cortex Moderate Regionally restricted euxassay_006183_18
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006183_18
TS23: upper leg muscle Strong Spotted euxassay_006183_18
Specimen euxassay_006183_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_19
TS23: diaphragm Weak Spotted euxassay_006183_19
TS23: trigeminal ganglion Strong Spotted euxassay_006183_19
TS23: facial ganglion Strong Spotted euxassay_006183_19
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_19
TS23: upper arm muscle Moderate Spotted euxassay_006183_19
TS23: upper leg muscle Strong Spotted euxassay_006183_19
Specimen euxassay_006183_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_20
TS23: diaphragm Weak Spotted euxassay_006183_20
TS23: trigeminal ganglion Strong Spotted euxassay_006183_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006183_20
TS23: upper arm muscle Moderate Spotted euxassay_006183_20
TS23: upper leg muscle Strong Spotted euxassay_006183_20
TS23: foot Weak Single cells euxassay_006183_20
Specimen euxassay_006183_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_21
TS23: diaphragm Weak Spotted euxassay_006183_21
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_21
TS23: upper arm muscle Strong Spotted euxassay_006183_21
TS23: upper leg muscle Strong Spotted euxassay_006183_21
TS23: foot Strong Spotted euxassay_006183_21
Specimen euxassay_006183_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Spotted euxassay_006183_22
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_006183_22
TS23: upper arm muscle Strong Spotted euxassay_006183_22
TS23: upper leg muscle Strong Spotted euxassay_006183_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory