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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823893
Gene symbol: Clca3a2
Gene name: chloride channel accessory 3A2
Probe: MGC clone 5738
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007074_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_01
Specimen euxassay_007074_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_02
Specimen euxassay_007074_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_03
Specimen euxassay_007074_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_04
Specimen euxassay_007074_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_05
TS23: ovary Strong Regionally restricted euxassay_007074_05
Specimen euxassay_007074_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_06
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_06
TS23: ovary Strong Regionally restricted euxassay_007074_06
Specimen euxassay_007074_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_07
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_07
TS23: heart atrium Moderate Regionally restricted euxassay_007074_07
TS23: ovary Strong Regionally restricted euxassay_007074_07
TS23: thalamus mantle layer Weak Regionally restricted euxassay_007074_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_007074_07 trigeminal motor nucleus
Specimen euxassay_007074_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_08
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_08
TS23: heart atrium Moderate Regionally restricted euxassay_007074_08
TS23: ovary Strong Regionally restricted euxassay_007074_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_08
TS23: midgut Weak Regionally restricted euxassay_007074_08
TS23: thalamus mantle layer Weak Regionally restricted euxassay_007074_08
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_007074_08
Specimen euxassay_007074_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_09
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_09
TS23: heart atrium Moderate Regionally restricted euxassay_007074_09
TS23: ovary Strong Regionally restricted euxassay_007074_09
TS23: metanephros Strong Regionally restricted euxassay_007074_09
TS23: adrenal gland Moderate Regionally restricted euxassay_007074_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_09
TS23: midgut Weak Regionally restricted euxassay_007074_09
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_007074_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007074_09 facial motor nucleus
Specimen euxassay_007074_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_10
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_10
TS23: heart atrium Moderate Regionally restricted euxassay_007074_10
TS23: metanephros Strong Regionally restricted euxassay_007074_10
TS23: adrenal gland Moderate Regionally restricted euxassay_007074_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_10
TS23: pancreas Strong Regionally restricted euxassay_007074_10
TS23: midgut Weak Regionally restricted euxassay_007074_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_007074_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007074_10 facial motor nucleus
Specimen euxassay_007074_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_11
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_11
TS23: metanephros Strong Regionally restricted euxassay_007074_11
TS23: adrenal gland Moderate Regionally restricted euxassay_007074_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_11
TS23: pancreas Strong Regionally restricted euxassay_007074_11
TS23: midgut Weak Regionally restricted euxassay_007074_11
TS23: aorta Strong Regionally restricted euxassay_007074_11
TS23: thyroid gland Strong Regionally restricted euxassay_007074_11
Specimen euxassay_007074_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_12
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_12
TS23: pancreas Moderate Regionally restricted euxassay_007074_12
TS23: bladder Strong Regionally restricted euxassay_007074_12
TS23: midgut Weak Regionally restricted euxassay_007074_12
TS23: thymus primordium Moderate Regionally restricted euxassay_007074_12
TS23: aorta Strong Regionally restricted euxassay_007074_12
Specimen euxassay_007074_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_13
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_13
TS23: bladder Strong Regionally restricted euxassay_007074_13
TS23: urethra Strong Regionally restricted euxassay_007074_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: midgut Weak Regionally restricted euxassay_007074_13
TS23: thymus primordium Moderate Regionally restricted euxassay_007074_13
TS23: aorta Strong Regionally restricted euxassay_007074_13
TS23: trachea Weak Regionally restricted euxassay_007074_13
Specimen euxassay_007074_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_14
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_14
TS23: heart atrium Moderate Regionally restricted euxassay_007074_14
TS23: bladder Strong Regionally restricted euxassay_007074_14
TS23: urethra Strong Regionally restricted euxassay_007074_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: midgut Weak Regionally restricted euxassay_007074_14
TS23: aorta Strong Regionally restricted euxassay_007074_14
TS23: trachea Weak Regionally restricted euxassay_007074_14
Specimen euxassay_007074_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_15
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_15
TS23: heart atrium Moderate Regionally restricted euxassay_007074_15
TS23: bladder Strong Regionally restricted euxassay_007074_15
TS23: urethra Strong Regionally restricted euxassay_007074_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: midgut Weak Regionally restricted euxassay_007074_15
TS23: thymus primordium Moderate Regionally restricted euxassay_007074_15
TS23: aorta Strong Regionally restricted euxassay_007074_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_007074_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007074_15 facial motor nucleus
Specimen euxassay_007074_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_16
TS23: heart atrium Moderate Regionally restricted euxassay_007074_16
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_16
TS23: midgut Weak Regionally restricted euxassay_007074_16
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_007074_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007074_16 facial motor nucleus
TS23: thyroid gland Strong Regionally restricted euxassay_007074_16
Specimen euxassay_007074_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_17
TS23: heart atrium Moderate Regionally restricted euxassay_007074_17
TS23: heart ventricle Moderate Regionally restricted euxassay_007074_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_17
TS23: midgut Weak Regionally restricted euxassay_007074_17
TS23: thalamus mantle layer Weak Regionally restricted euxassay_007074_17
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_007074_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_007074_17 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007074_17 facial motor nucleus
Specimen euxassay_007074_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_18
TS23: heart atrium Moderate Regionally restricted euxassay_007074_18
TS23: metanephros Strong Regionally restricted euxassay_007074_18
TS23: adrenal gland Weak Regionally restricted euxassay_007074_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_18
TS23: midgut Weak Regionally restricted euxassay_007074_18
TS23: thalamus mantle layer Weak Regionally restricted euxassay_007074_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_007074_18 trigeminal motor nucleus
Specimen euxassay_007074_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_19
TS23: heart atrium Moderate Regionally restricted euxassay_007074_19
TS23: metanephros Strong Regionally restricted euxassay_007074_19
TS23: adrenal gland Weak Regionally restricted euxassay_007074_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007074_19
Specimen euxassay_007074_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_20
TS23: heart atrium Moderate Regionally restricted euxassay_007074_20
TS23: metanephros Strong Regionally restricted euxassay_007074_20
TS23: adrenal gland Weak Regionally restricted euxassay_007074_20
TS23: turbinate bone primordium Weak Regionally restricted euxassay_007074_20
Specimen euxassay_007074_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_21
TS23: heart atrium Moderate Regionally restricted euxassay_007074_21
TS23: ovary Strong Regionally restricted euxassay_007074_21
TS23: metanephros Strong Regionally restricted euxassay_007074_21
TS23: adrenal gland Weak Regionally restricted euxassay_007074_21
TS23: turbinate bone primordium Weak Regionally restricted euxassay_007074_21
Specimen euxassay_007074_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_22
TS23: heart atrium Moderate Regionally restricted euxassay_007074_22
TS23: ovary Strong Regionally restricted euxassay_007074_22
Specimen euxassay_007074_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_23
TS23: heart atrium Moderate Regionally restricted euxassay_007074_23
TS23: ovary Strong Regionally restricted euxassay_007074_23
Specimen euxassay_007074_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_007074_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory