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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823840
Gene symbol: Chd7
Gene name: chromodomain helicase DNA binding protein 7
Probe: T31237
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010758_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_02
Specimen euxassay_010758_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_010758_03
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_03
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_03
TS23: pons marginal layer Moderate Regionally restricted euxassay_010758_03
Specimen euxassay_010758_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_04
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_04
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_04
Specimen euxassay_010758_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_05
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_05
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_05
TS23: pons marginal layer Moderate Regionally restricted euxassay_010758_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010758_05
Specimen euxassay_010758_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_06
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_010758_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_06
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_06
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010758_06
Specimen euxassay_010758_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_010758_07
Specimen euxassay_010758_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_08
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_08
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_08
Specimen euxassay_010758_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_09
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_09
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_09
Specimen euxassay_010758_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_10
Specimen euxassay_010758_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_010758_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_11
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_11
Specimen euxassay_010758_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_010758_12
TS23: vomeronasal organ Weak Regionally restricted euxassay_010758_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_12
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_12
Specimen euxassay_010758_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_010758_13
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_13
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_13
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_010758_13
Specimen euxassay_010758_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_010758_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_14
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_14
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_14
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_14
Specimen euxassay_010758_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_010758_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_15
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_010758_15
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_010758_15
Specimen euxassay_010758_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_16
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_010758_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_010758_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_16
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010758_16
Specimen euxassay_010758_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010758_17
Specimen euxassay_010758_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010758_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010758_18
Specimen euxassay_010758_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_010758_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_19
Specimen euxassay_010758_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_010758_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_20
Specimen euxassay_010758_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_21
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010758_21
Specimen euxassay_010758_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_22
Specimen euxassay_010758_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_010758_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory