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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823759
Gene symbol: Cdca7l
Gene name: cell division cycle associated 7 like
Probe: MGC clone 11998
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003467_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_01
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_01
TS23: liver lobe Moderate Regionally restricted euxassay_003467_01
TS23: neural retina Moderate Uniform euxassay_003467_01
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_01
TS23: stomach Moderate Regionally restricted euxassay_003467_01
TS23: epidermis Strong Regionally restricted euxassay_003467_01

Specimen euxassay_003467_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_02
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_02
TS23: liver lobe Moderate Regionally restricted euxassay_003467_02
TS23: neural retina Moderate Uniform euxassay_003467_02
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_02
TS23: vibrissa Moderate Regionally restricted euxassay_003467_02
TS23: left lung Strong Regionally restricted euxassay_003467_02
TS23: stomach Strong Regionally restricted euxassay_003467_02
TS23: epidermis Strong Regionally restricted euxassay_003467_02

Specimen euxassay_003467_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_03
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_03
TS23: liver lobe Weak Regionally restricted euxassay_003467_03
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_03
TS23: vibrissa Moderate Regionally restricted euxassay_003467_03
TS23: left lung Strong Regionally restricted euxassay_003467_03
TS23: stomach Strong Regionally restricted euxassay_003467_03
TS23: epidermis Strong Regionally restricted euxassay_003467_03

Specimen euxassay_003467_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_04
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_04
TS23: liver lobe Weak Regionally restricted euxassay_003467_04
TS23: vibrissa Moderate Regionally restricted euxassay_003467_04
TS23: left lung Strong Regionally restricted euxassay_003467_04
TS23: stomach Strong Regionally restricted euxassay_003467_04
TS23: epidermis Strong Regionally restricted euxassay_003467_04
TS23: testis Moderate Regionally restricted euxassay_003467_04

Specimen euxassay_003467_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_05
TS23: liver lobe Weak Regionally restricted euxassay_003467_05
TS23: vibrissa Moderate Regionally restricted euxassay_003467_05
TS23: left lung Strong Regionally restricted euxassay_003467_05
TS23: stomach Strong Regionally restricted euxassay_003467_05
TS23: epidermis Strong Regionally restricted euxassay_003467_05
TS23: testis Moderate Regionally restricted euxassay_003467_05
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_05

Specimen euxassay_003467_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_06
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003467_06
TS23: inferior colliculus Present euxassay_003467_06
TS23: liver lobe Weak Regionally restricted euxassay_003467_06
TS23: vibrissa Moderate Regionally restricted euxassay_003467_06
TS23: left lung Strong Regionally restricted euxassay_003467_06
TS23: stomach Strong Regionally restricted euxassay_003467_06
TS23: midgut Strong Regionally restricted euxassay_003467_06
TS23: epidermis Strong Regionally restricted euxassay_003467_06
TS23: testis Moderate Regionally restricted euxassay_003467_06
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_06
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_06
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_06

Specimen euxassay_003467_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_07
TS23: inferior colliculus Present euxassay_003467_07
TS23: liver lobe Weak Regionally restricted euxassay_003467_07
TS23: left lung Strong Regionally restricted euxassay_003467_07
TS23: midgut Strong Regionally restricted euxassay_003467_07
TS23: stomach Strong Regionally restricted euxassay_003467_07
TS23: epidermis Strong Regionally restricted euxassay_003467_07
TS23: testis Moderate Regionally restricted euxassay_003467_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_07
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_07

Specimen euxassay_003467_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_08
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_08
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_08
TS23: inferior colliculus Present euxassay_003467_08
TS23: liver lobe Weak Regionally restricted euxassay_003467_08
TS23: left lung Strong Regionally restricted euxassay_003467_08
TS23: midgut Strong Regionally restricted euxassay_003467_08
TS23: stomach Strong Regionally restricted euxassay_003467_08
TS23: epidermis Strong Regionally restricted euxassay_003467_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_08
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_08
TS23: pancreas Strong Regionally restricted euxassay_003467_08

Specimen euxassay_003467_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_09
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_09
TS23: inferior colliculus Present euxassay_003467_09
TS23: liver lobe Weak Regionally restricted euxassay_003467_09
TS23: left lung Strong Regionally restricted euxassay_003467_09
TS23: stomach Strong Regionally restricted euxassay_003467_09
TS23: midgut Strong Regionally restricted euxassay_003467_09
TS23: epidermis Strong Regionally restricted euxassay_003467_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_09
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_09
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003467_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_09
TS23: pancreas Strong Regionally restricted euxassay_003467_09

Specimen euxassay_003467_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_10
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_10
TS23: inferior colliculus Present euxassay_003467_10
TS23: liver lobe Weak Regionally restricted euxassay_003467_10
TS23: left lung Strong Regionally restricted euxassay_003467_10
TS23: midgut Strong Regionally restricted euxassay_003467_10
TS23: epidermis Strong Regionally restricted euxassay_003467_10
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_10
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003467_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_10
TS23: thymus primordium Strong Uniform euxassay_003467_10
TS23: pancreas Strong Regionally restricted euxassay_003467_10
TS23: adenohypophysis Strong Regionally restricted euxassay_003467_10

Specimen euxassay_003467_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_11
TS23: inferior colliculus Present euxassay_003467_11
TS23: liver lobe Weak Regionally restricted euxassay_003467_11
TS23: left lung Strong Regionally restricted euxassay_003467_11
TS23: midgut Strong Regionally restricted euxassay_003467_11
TS23: hindgut Strong Regionally restricted euxassay_003467_11
TS23: epidermis Strong Regionally restricted euxassay_003467_11
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003467_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_11
TS23: thymus primordium Strong Uniform euxassay_003467_11
TS23: pancreas Strong Regionally restricted euxassay_003467_11
TS23: adenohypophysis Strong Regionally restricted euxassay_003467_11
TS23: esophagus Strong Regionally restricted euxassay_003467_11

Specimen euxassay_003467_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_12
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_12
TS23: inferior colliculus Present euxassay_003467_12
TS23: liver lobe Weak Regionally restricted euxassay_003467_12
TS23: trachea Moderate Regionally restricted euxassay_003467_12
TS23: left lung Strong Regionally restricted euxassay_003467_12
TS23: midgut Strong Regionally restricted euxassay_003467_12
TS23: hindgut Strong Regionally restricted euxassay_003467_12
TS23: epidermis Strong Regionally restricted euxassay_003467_12
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003467_12
TS23: thymus primordium Strong Uniform euxassay_003467_12
TS23: pancreas Strong Regionally restricted euxassay_003467_12
TS23: adenohypophysis Strong Regionally restricted euxassay_003467_12
TS23: esophagus Strong Regionally restricted euxassay_003467_12
TS23: urethra Moderate Regionally restricted euxassay_003467_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder fundus Weak Regionally restricted euxassay_003467_12
TS23: rectum lumen Moderate Regionally restricted euxassay_003467_12

Specimen euxassay_003467_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_13
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_13
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_13
TS23: inferior colliculus Present euxassay_003467_13
TS23: liver lobe Weak Regionally restricted euxassay_003467_13
TS23: trachea Moderate Regionally restricted euxassay_003467_13
TS23: right lung Strong Regionally restricted euxassay_003467_13
TS23: midgut Strong Regionally restricted euxassay_003467_13
TS23: hindgut Strong Regionally restricted euxassay_003467_13
TS23: epidermis Strong Regionally restricted euxassay_003467_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_13
TS23: thymus primordium Strong Uniform euxassay_003467_13
TS23: adenohypophysis Strong Regionally restricted euxassay_003467_13
TS23: esophagus Strong Regionally restricted euxassay_003467_13
TS23: urethra Moderate Regionally restricted euxassay_003467_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder fundus Weak Regionally restricted euxassay_003467_13
TS23: rectum lumen Moderate Regionally restricted euxassay_003467_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_003467_13

Specimen euxassay_003467_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_14
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_14
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_14
TS23: inferior colliculus Present euxassay_003467_14
TS23: liver lobe Weak Regionally restricted euxassay_003467_14
TS23: trachea Moderate Regionally restricted euxassay_003467_14
TS23: right lung Strong Regionally restricted euxassay_003467_14
TS23: hindgut Strong Regionally restricted euxassay_003467_14
TS23: midgut Strong Regionally restricted euxassay_003467_14
TS23: epidermis Strong Regionally restricted euxassay_003467_14
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003467_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_14
TS23: thymus primordium Strong Uniform euxassay_003467_14
TS23: pancreas Strong Regionally restricted euxassay_003467_14

Specimen euxassay_003467_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_15
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003467_15
TS23: inferior colliculus Present euxassay_003467_15
TS23: liver lobe Weak Regionally restricted euxassay_003467_15
TS23: right lung Strong Regionally restricted euxassay_003467_15
TS23: midgut Strong Regionally restricted euxassay_003467_15
TS23: hindgut Strong Regionally restricted euxassay_003467_15
TS23: epidermis Strong Regionally restricted euxassay_003467_15
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_15
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003467_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_15
TS23: thymus primordium Strong Uniform euxassay_003467_15
TS23: pancreas Strong Regionally restricted euxassay_003467_15

Specimen euxassay_003467_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_16
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_003467_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003467_16
TS23: inferior colliculus Present euxassay_003467_16
TS23: liver lobe Moderate Regionally restricted euxassay_003467_16
TS23: right lung Strong Regionally restricted euxassay_003467_16
TS23: hindgut Strong Regionally restricted euxassay_003467_16
TS23: midgut Strong Regionally restricted euxassay_003467_16
TS23: epidermis Strong Regionally restricted euxassay_003467_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_16
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_003467_16
TS23: pancreas Strong Regionally restricted euxassay_003467_16

Specimen euxassay_003467_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_17
TS23: right lung Strong Regionally restricted euxassay_003467_17
TS23: midgut Strong Regionally restricted euxassay_003467_17
TS23: hindgut Strong Regionally restricted euxassay_003467_17
TS23: epidermis Strong Regionally restricted euxassay_003467_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_17
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_17
TS23: pancreas Moderate Regionally restricted euxassay_003467_17

Specimen euxassay_003467_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_18
TS23: vibrissa Moderate Regionally restricted euxassay_003467_18
TS23: right lung Strong Regionally restricted euxassay_003467_18
TS23: midgut Strong Regionally restricted euxassay_003467_18
TS23: hindgut Strong Regionally restricted euxassay_003467_18
TS23: epidermis Strong Regionally restricted euxassay_003467_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_18
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003467_18

Specimen euxassay_003467_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_19
TS23: vibrissa Moderate Regionally restricted euxassay_003467_19
TS23: right lung Strong Regionally restricted euxassay_003467_19
TS23: midgut Strong Regionally restricted euxassay_003467_19
TS23: epidermis Strong Regionally restricted euxassay_003467_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003467_19
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_19

Specimen euxassay_003467_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003467_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003467_20
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_20
TS23: vibrissa Moderate Regionally restricted euxassay_003467_20
TS23: right lung Strong Regionally restricted euxassay_003467_20
TS23: epidermis Strong Regionally restricted euxassay_003467_20
TS23: testis Moderate Regionally restricted euxassay_003467_20
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_20

Specimen euxassay_003467_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_003467_21
TS23: neural retina Moderate Uniform euxassay_003467_21
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_21
TS23: vibrissa Weak Regionally restricted euxassay_003467_21
TS23: right lung Strong Regionally restricted euxassay_003467_21
TS23: epidermis Strong Regionally restricted euxassay_003467_21
TS23: testis Moderate Regionally restricted euxassay_003467_21
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003467_21

Specimen euxassay_003467_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Uniform euxassay_003467_22
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_22
TS23: vibrissa Weak Regionally restricted euxassay_003467_22
TS23: right lung Strong Regionally restricted euxassay_003467_22
TS23: epidermis Strong Regionally restricted euxassay_003467_22
TS23: testis Moderate Regionally restricted euxassay_003467_22

Specimen euxassay_003467_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Uniform euxassay_003467_23
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003467_23
TS23: lung Strong Regionally restricted euxassay_003467_23
TS23: right lung Strong Regionally restricted euxassay_003467_23
TS23: epidermis Strong Regionally restricted euxassay_003467_23


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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory