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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823734
Gene symbol: Cd47
Gene name: CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Probe: MGC clone 13838
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003895_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_01
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_01
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003895_01
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_01
Specimen euxassay_003895_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_02
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_02
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_003895_02
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_02
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_02
Specimen euxassay_003895_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_03
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_03
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_03
Specimen euxassay_003895_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_04
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003895_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_04
Specimen euxassay_003895_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003895_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_05
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_05
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003895_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_05
Specimen euxassay_003895_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_06
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003895_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_06
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_06
Specimen euxassay_003895_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_07
TS23: thymus primordium Weak Uniform euxassay_003895_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003895_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_07
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_07
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_07
Specimen euxassay_003895_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_08
TS23: thymus primordium Moderate Uniform euxassay_003895_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003895_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_08
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_08
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_08
Specimen euxassay_003895_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_09
TS23: thymus primordium Moderate Uniform euxassay_003895_09
TS23: telencephalon marginal layer Weak Regionally restricted euxassay_003895_09
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_09
TS23: spinal cord floor plate Strong Regionally restricted euxassay_003895_09
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_09
Specimen euxassay_003895_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_10
TS23: telencephalon marginal layer Weak Regionally restricted euxassay_003895_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_10
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_10
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_10
Specimen euxassay_003895_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_003895_11
TS23: thymus primordium Moderate Uniform euxassay_003895_11
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_003895_11
TS23: telencephalon marginal layer Weak Regionally restricted euxassay_003895_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_11
TS23: ventral grey horn Weak Regionally restricted euxassay_003895_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_11
Specimen euxassay_003895_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_12
TS23: thymus primordium Moderate Uniform euxassay_003895_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003895_12
TS23: telencephalon marginal layer Weak Regionally restricted euxassay_003895_12
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_003895_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_12
Specimen euxassay_003895_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003895_13
TS23: telencephalon marginal layer Weak Regionally restricted euxassay_003895_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_13
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_13
Specimen euxassay_003895_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003895_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_14
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_14
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003895_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_14
Specimen euxassay_003895_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003895_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_003895_15
TS23: thalamus mantle layer Strong Regionally restricted euxassay_003895_15
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_15
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003895_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_15
TS23: lower lip Weak Regionally restricted euxassay_003895_15
TS23: upper lip Weak Regionally restricted euxassay_003895_15
Specimen euxassay_003895_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003895_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_003895_16
TS23: thalamus Strong Regionally restricted euxassay_003895_16
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_16
TS23: lower lip Weak Regionally restricted euxassay_003895_16
TS23: upper lip Weak Regionally restricted euxassay_003895_16
Specimen euxassay_003895_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_003895_17
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_003895_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_003895_17
TS23: upper lip Weak Regionally restricted euxassay_003895_17
TS23: lower lip Weak Regionally restricted euxassay_003895_17
Specimen euxassay_003895_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_003895_18
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_003895_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_18
TS23: upper lip Weak Regionally restricted euxassay_003895_18
TS23: lower lip Weak Regionally restricted euxassay_003895_18
Specimen euxassay_003895_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_19
TS23: upper lip Weak Regionally restricted euxassay_003895_19
TS23: lower lip Weak Regionally restricted euxassay_003895_19
Specimen euxassay_003895_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Strong Regionally restricted euxassay_003895_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003895_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003895_20
TS23: upper lip Weak Regionally restricted euxassay_003895_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory