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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823681
Gene symbol: Ccdc60
Gene name: coiled-coil domain containing 60
Probe: T38185
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012818_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_01
TS23: vault of skull Moderate Regionally restricted euxassay_012818_01
TS23: rib Weak Regionally restricted euxassay_012818_01
Specimen euxassay_012818_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_02
TS23: rib Weak Regionally restricted euxassay_012818_02
Specimen euxassay_012818_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_03
TS23: facial ganglion Weak Regionally restricted euxassay_012818_03
TS23: mandible Weak Regionally restricted euxassay_012818_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_03
TS23: rib Weak Regionally restricted euxassay_012818_03
Specimen euxassay_012818_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_04
TS23: facial ganglion Weak Regionally restricted euxassay_012818_04
TS23: mandible Weak Regionally restricted euxassay_012818_04
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012818_04
Specimen euxassay_012818_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_05
TS23: mandible Moderate Regionally restricted euxassay_012818_05
TS23: maxilla Moderate Regionally restricted euxassay_012818_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012818_05
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_05
Specimen euxassay_012818_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_06
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012818_06
TS23: mandible Weak Regionally restricted euxassay_012818_06
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_06
Specimen euxassay_012818_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_07
TS23: maxilla Weak Regionally restricted euxassay_012818_07
TS23: mandible Weak Regionally restricted euxassay_012818_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012818_07 facial motor nucleus
TS23: pons mantle layer Weak Regionally restricted euxassay_012818_07 trigeminal motor nucleus
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_012818_07
Specimen euxassay_012818_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_08
TS23: mandible Weak Regionally restricted euxassay_012818_08
TS23: maxilla Weak Regionally restricted euxassay_012818_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012818_08 facial motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_012818_08
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012818_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012818_08
Specimen euxassay_012818_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_09
TS23: ventral grey horn Weak Regionally restricted euxassay_012818_09
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_09
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012818_09
Specimen euxassay_012818_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_012818_10
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012818_10
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_10
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_012818_10
Specimen euxassay_012818_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_012818_11
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_11
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012818_11
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_11
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_012818_11
Specimen euxassay_012818_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_012818_12
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_12
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012818_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012818_12
Specimen euxassay_012818_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_012818_13
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_13
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_13
Specimen euxassay_012818_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_012818_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012818_14 facial motor nucleus
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_14
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012818_14
Specimen euxassay_012818_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_012818_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012818_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012818_15 facial motor nucleus
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_012818_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012818_15
Specimen euxassay_012818_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_16
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012818_16
TS23: maxilla Moderate Regionally restricted euxassay_012818_16
TS23: mandible Moderate Regionally restricted euxassay_012818_16
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012818_16
Specimen euxassay_012818_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_17
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012818_17
TS23: maxilla Moderate Regionally restricted euxassay_012818_17
TS23: mandible Moderate Regionally restricted euxassay_012818_17
TS23: pons mantle layer Weak Regionally restricted euxassay_012818_17 trigeminal motor nucleus
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_17
Specimen euxassay_012818_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_18
TS23: maxilla Moderate Regionally restricted euxassay_012818_18
TS23: mandible Moderate Regionally restricted euxassay_012818_18
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_012818_18
TS23: rib Weak Regionally restricted euxassay_012818_18
Specimen euxassay_012818_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_19
TS23: mandible Weak Regionally restricted euxassay_012818_19
TS23: maxilla Weak Regionally restricted euxassay_012818_19
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_012818_19
TS23: rib Weak Regionally restricted euxassay_012818_19
Specimen euxassay_012818_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_20
TS23: mandible Weak Regionally restricted euxassay_012818_20
TS23: rib Weak Regionally restricted euxassay_012818_20
Specimen euxassay_012818_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012818_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_21
TS23: rib Weak Regionally restricted euxassay_012818_21
Specimen euxassay_012818_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_22
TS23: vault of skull Moderate Regionally restricted euxassay_012818_22
TS23: rib Weak Regionally restricted euxassay_012818_22
Specimen euxassay_012818_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_23
TS23: vault of skull Moderate Regionally restricted euxassay_012818_23
TS23: rib Weak Regionally restricted euxassay_012818_23
Specimen euxassay_012818_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012818_24
TS23: vault of skull Moderate Regionally restricted euxassay_012818_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory