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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823536
Gene symbol: C1ql4
Gene name: complement component 1, q subcomponent-like 4
Probe: T39316
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S5 - C1qtnf11: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: midbrain Moderate
Specimen euxassay_013202_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013202_04
TS23: midbrain-hindbrain junction Present euxassay_013202_04
Specimen euxassay_013202_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013202_05
TS23: midbrain-hindbrain junction Present euxassay_013202_05
TS23: pons mantle layer Weak Regionally restricted euxassay_013202_05
Specimen euxassay_013202_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013202_06
TS23: midbrain-hindbrain junction Present euxassay_013202_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_013202_06
Specimen euxassay_013202_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_013202_14
Specimen euxassay_013202_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013202_15
TS23: midbrain-hindbrain junction Present euxassay_013202_15
TS23: pons mantle layer Weak Regionally restricted euxassay_013202_15
Specimen euxassay_013202_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013202_16
TS23: midbrain-hindbrain junction Present euxassay_013202_16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory