Begain RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type:	RNA in situ
MGI Accession ID:	MGI:4823458
Gene symbol:	Begain
Gene name:	brain-enriched guanylate kinase-associated

Probe:	T39813
Probe preparation:	Antisense labelled with digoxigenin RNA
Visualized with:	Alkaline phosphatase
Assay notes:	Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.

Results

euxassay_014034_01 ©

Specimen euxassay_014034_01: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: cornea	Weak	Regionally restricted	euxassay_014034_01

euxassay_014034_02 ©

Specimen euxassay_014034_02: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: neural retina	Weak	Regionally restricted	euxassay_014034_02
TS23: cornea	Weak	Regionally restricted	euxassay_014034_02

euxassay_014034_03 ©

Specimen euxassay_014034_03: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: cornea	Weak	Regionally restricted	euxassay_014034_03
TS23: neural retina	Weak	Regionally restricted	euxassay_014034_03

euxassay_014034_04 ©

Specimen euxassay_014034_04: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_04
TS23: cornea	Weak	Regionally restricted	euxassay_014034_04

euxassay_014034_05 ©

Specimen euxassay_014034_05: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_05

euxassay_014034_06 ©

Specimen euxassay_014034_06: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_06
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_06
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_06

euxassay_014034_07 ©

Specimen euxassay_014034_07: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_07
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_07
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_07
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_07
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_07

euxassay_014034_08 ©

Specimen euxassay_014034_08: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_08
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_08
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_08
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_08
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_08
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_08

euxassay_014034_09 ©

Specimen euxassay_014034_09: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_09
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_09
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_09
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_09
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_09
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_09

euxassay_014034_10 ©

Specimen euxassay_014034_10: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_10
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_10
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_10
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_10
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_10

euxassay_014034_11 ©

Specimen euxassay_014034_11: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_11
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_11
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_11
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_11
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_11
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_11
TS23: lower lip	Moderate	Regionally restricted	euxassay_014034_11

euxassay_014034_12 ©

Specimen euxassay_014034_12: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_12
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_12
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_12
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_12
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_12
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_12
TS23: lower lip	Moderate	Regionally restricted	euxassay_014034_12

euxassay_014034_13 ©

Specimen euxassay_014034_13: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_13
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_13
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_13
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_13
TS23: upper lip	Weak	Regionally restricted	euxassay_014034_13
TS23: lower lip	Weak	Regionally restricted	euxassay_014034_13

euxassay_014034_14 ©

Specimen euxassay_014034_14: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: ventral grey horn	Strong	Single cells	euxassay_014034_14
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_14
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_14
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_14
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_14
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_14
TS23: upper lip	Weak	Regionally restricted	euxassay_014034_14
TS23: lower lip	Weak	Regionally restricted	euxassay_014034_14

euxassay_014034_15 ©

Specimen euxassay_014034_15: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_15
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_15
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_15
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_15
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_15
TS23: lower lip	Weak	Regionally restricted	euxassay_014034_15
TS23: upper lip	Weak	Regionally restricted	euxassay_014034_15

Specimen euxassay_014034_16: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_16
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_16
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_16
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_16
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_16
TS23: lower lip	Weak	Regionally restricted	euxassay_014034_16

Specimen euxassay_014034_17: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_17
TS23: medulla oblongata basal plate mantle layer	Strong	Single cells	euxassay_014034_17
TS23: diencephalon lateral wall mantle layer	Strong	Single cells	euxassay_014034_17
TS23: midbrain mantle layer	Strong	Single cells	euxassay_014034_17
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_17

Specimen euxassay_014034_18: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: pons mantle layer	Strong	Single cells	euxassay_014034_18

Specimen euxassay_014034_19: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_19

Specimen euxassay_014034_20: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_20

Specimen euxassay_014034_21: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: telencephalon mantle layer	Strong	Single cells	euxassay_014034_21

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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