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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823330
Gene symbol: Atp6v1c1
Gene name: ATPase, H+ transporting, lysosomal V1 subunit C1
Probe: IMAGE clone 1972366
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000870_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_01
Specimen euxassay_000870_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_02
TS23: facial ganglion Moderate Uniform euxassay_000870_02
TS23: vestibular ganglion Moderate Uniform euxassay_000870_02
Specimen euxassay_000870_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Moderate Uniform euxassay_000870_03
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_03
TS23: vestibular ganglion Moderate Uniform euxassay_000870_03
TS23: vibrissa Moderate Regionally restricted euxassay_000870_03
Specimen euxassay_000870_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: inferior glossopharyngeal ganglion Moderate Uniform euxassay_000870_04
TS23: superior glossopharyngeal ganglion Moderate Uniform euxassay_000870_04
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_04
TS23: facial ganglion Moderate Uniform euxassay_000870_04
TS23: vibrissa Moderate Regionally restricted euxassay_000870_04
Specimen euxassay_000870_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_05
TS23: superior vagus ganglion Moderate Uniform euxassay_000870_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000870_05
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000870_05 facial motor nucleus
Specimen euxassay_000870_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: inferior vagus ganglion Moderate Uniform euxassay_000870_06
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000870_06
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000870_06 facial motor nucleus
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000870_06
Specimen euxassay_000870_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_000870_07
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000870_07
Specimen euxassay_000870_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_000870_08
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_000870_08
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000870_08
Specimen euxassay_000870_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_000870_09
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_000870_09
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000870_09
Specimen euxassay_000870_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_000870_10
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000870_10 facial motor nucleus
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000870_10
Specimen euxassay_000870_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_11
TS23: inferior vagus ganglion Moderate Uniform euxassay_000870_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000870_11
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000870_11 facial motor nucleus
Specimen euxassay_000870_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: superior glossopharyngeal ganglion Moderate Uniform euxassay_000870_12
TS23: inferior glossopharyngeal ganglion Moderate Uniform euxassay_000870_12
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_12
TS23: facial ganglion Moderate Uniform euxassay_000870_12
Specimen euxassay_000870_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibular ganglion Moderate Uniform euxassay_000870_13
TS23: facial ganglion Moderate Uniform euxassay_000870_13
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_13
TS23: inferior glossopharyngeal ganglion Moderate Uniform euxassay_000870_13
TS23: vibrissa Moderate Regionally restricted euxassay_000870_13
Specimen euxassay_000870_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Uniform euxassay_000870_14
TS23: vestibular ganglion Moderate Uniform euxassay_000870_14
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_14
TS23: vibrissa Moderate Regionally restricted euxassay_000870_14
Specimen euxassay_000870_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Uniform euxassay_000870_15
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_15
TS23: vibrissa Moderate Regionally restricted euxassay_000870_15
Specimen euxassay_000870_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000870_16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory