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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822723
Gene symbol: Brme1
Gene name: break repair meiotic recombinase recruitment factor 1
Probe: MGC clone 99971
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005969_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_01
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_01

Specimen euxassay_005969_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_02
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_02

Specimen euxassay_005969_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_03
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_03
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_03

Specimen euxassay_005969_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_04
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_04
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_04
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_04
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_04
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_04

Specimen euxassay_005969_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_05
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_05
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_05
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_05
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_05
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_05
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_05
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_05

Specimen euxassay_005969_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_06
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_06
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_06
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_06
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_06
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_06
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_06
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_06
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_06
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_06
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_06

Specimen euxassay_005969_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_07
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_07
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_07
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_07
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_07
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_07
TS23: clavicle Strong Regionally restricted euxassay_005969_07
TS23: renal cortex Strong Regionally restricted euxassay_005969_07
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_07
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_07
TS23: choroid invagination Strong Regionally restricted euxassay_005969_07
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_07

Specimen euxassay_005969_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_08
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_08
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_08
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_08
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_08
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_08
TS23: renal cortex Strong Regionally restricted euxassay_005969_08
TS23: renal pelvis Strong Regionally restricted euxassay_005969_08
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_08
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_08
TS23: choroid invagination Strong Regionally restricted euxassay_005969_08
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_08

Specimen euxassay_005969_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_09
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_09
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_09
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_09
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_09
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_09
TS23: renal pelvis Strong Regionally restricted euxassay_005969_09
TS23: renal cortex Strong Regionally restricted euxassay_005969_09
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_09
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_09
TS23: choroid invagination Strong Regionally restricted euxassay_005969_09
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_09

Specimen euxassay_005969_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_10
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_10
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_10
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_10
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_10
TS23: ureter Strong Regionally restricted euxassay_005969_10
TS23: renal cortex Strong Regionally restricted euxassay_005969_10
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_10
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_10
TS23: choroid invagination Strong Regionally restricted euxassay_005969_10
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_10

Specimen euxassay_005969_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_11
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_11
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_11
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_11
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_11
TS23: ureter Strong Regionally restricted euxassay_005969_11
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_11
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_11
TS23: choroid invagination Strong Regionally restricted euxassay_005969_11

Specimen euxassay_005969_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_12
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_12
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_12
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_12
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_12
TS23: anterior naris epithelium Strong Regionally restricted euxassay_005969_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_12
TS23: ureter Strong Regionally restricted euxassay_005969_12
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_12
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_12
TS23: choroid invagination Strong Regionally restricted euxassay_005969_12

Specimen euxassay_005969_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_13
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_13
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_13
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_13
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_13
TS23: anterior naris epithelium Strong Regionally restricted euxassay_005969_13
TS23: external naris epithelium Strong Regionally restricted euxassay_005969_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_13
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_005969_13
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_13
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_13
TS23: choroid invagination Strong Regionally restricted euxassay_005969_13

Specimen euxassay_005969_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_14
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_14
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_14
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_14
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_14
TS23: anterior naris epithelium Strong Regionally restricted euxassay_005969_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_14
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_14
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_14

Specimen euxassay_005969_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_15
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_15
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_15
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_15
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_15
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_15
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_005969_15
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_15
TS23: ureter Strong Regionally restricted euxassay_005969_15
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_15
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_15

Specimen euxassay_005969_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_16
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_16
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_16
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_16
TS23: spinal cord meninges Strong Regionally restricted euxassay_005969_16
TS23: anterior naris epithelium Strong Regionally restricted euxassay_005969_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_16
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_005969_16
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_16
TS23: clavicle Strong Regionally restricted euxassay_005969_16
TS23: renal cortex Strong Regionally restricted euxassay_005969_16
TS23: ureter Strong Regionally restricted euxassay_005969_16
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_16
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_16

Specimen euxassay_005969_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_17
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_17
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_17
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_17
TS23: anterior naris epithelium Strong Regionally restricted euxassay_005969_17
TS23: external naris epithelium Strong Regionally restricted euxassay_005969_17
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_17
TS23: clavicle Strong Regionally restricted euxassay_005969_17
TS23: renal pelvis Strong Regionally restricted euxassay_005969_17
TS23: ureter Strong Regionally restricted euxassay_005969_17
TS23: renal cortex Strong Regionally restricted euxassay_005969_17
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_17
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_17
TS23: choroid invagination Strong Regionally restricted euxassay_005969_17

Specimen euxassay_005969_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_18
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_18
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_18
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_18
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_18
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_18
TS23: renal pelvis Strong Regionally restricted euxassay_005969_18
TS23: renal cortex Strong Regionally restricted euxassay_005969_18
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_18
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_18
TS23: choroid invagination Strong Regionally restricted euxassay_005969_18

Specimen euxassay_005969_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_19
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_19
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_19
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_19
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_19
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_19
TS23: renal pelvis Strong Regionally restricted euxassay_005969_19
TS23: renal cortex Strong Regionally restricted euxassay_005969_19
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_19
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_19
TS23: choroid invagination Strong Regionally restricted euxassay_005969_19

Specimen euxassay_005969_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_20
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_20
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_20
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_20
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_20
TS23: submandibular gland primordium mesenchyme Strong Regionally restricted euxassay_005969_20
TS23: renal pelvis Strong Regionally restricted euxassay_005969_20
TS23: renal cortex Strong Regionally restricted euxassay_005969_20
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_20
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_20
TS23: choroid invagination Strong Regionally restricted euxassay_005969_20
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_20

Specimen euxassay_005969_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_21
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_21
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_21
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_21
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_21
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_21
TS23: olfactory epithelium Strong Regionally restricted euxassay_005969_21
TS23: renal cortex Strong Regionally restricted euxassay_005969_21
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_21
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_005969_21
TS23: choroid invagination Strong Regionally restricted euxassay_005969_21
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_21

Specimen euxassay_005969_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_22
TS23: midbrain meninges Strong Regionally restricted euxassay_005969_22
TS23: hindbrain meninges Strong Regionally restricted euxassay_005969_22
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_22
TS23: diencephalon meninges Strong Regionally restricted euxassay_005969_22
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_22
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_22

Specimen euxassay_005969_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_23
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_23
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_23
TS23: vibrissa dermal component Strong Regionally restricted euxassay_005969_23

Specimen euxassay_005969_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005969_24
TS23: telencephalon meninges Strong Regionally restricted euxassay_005969_24
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_005969_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory