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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822715
Gene symbol: Ccer1
Gene name: coiled-coil glutamate-rich protein 1
Probe: T37344
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011210_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011210_01
TS23: forebrain Strong Regionally restricted euxassay_011210_01
Specimen euxassay_011210_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011210_02
TS23: forebrain Strong Regionally restricted euxassay_011210_02
Specimen euxassay_011210_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011210_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_03
TS23: forebrain Strong Regionally restricted euxassay_011210_03
TS23: hindbrain Strong Regionally restricted euxassay_011210_03
Specimen euxassay_011210_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_04
TS23: facial ganglion Strong Regionally restricted euxassay_011210_04
TS23: hindbrain Strong Regionally restricted euxassay_011210_04
TS23: forebrain Strong Regionally restricted euxassay_011210_04
Specimen euxassay_011210_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_05
TS23: facial ganglion Strong Regionally restricted euxassay_011210_05
TS23: hindbrain Strong Regionally restricted euxassay_011210_05
TS23: forebrain Strong Regionally restricted euxassay_011210_05
Specimen euxassay_011210_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_06
TS23: facial ganglion Strong Regionally restricted euxassay_011210_06
TS23: midbrain Strong Regionally restricted euxassay_011210_06
TS23: hindbrain Strong Regionally restricted euxassay_011210_06
TS23: forebrain Strong Regionally restricted euxassay_011210_06
Specimen euxassay_011210_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011210_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011210_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_07
TS23: facial ganglion Strong Regionally restricted euxassay_011210_07
TS23: midbrain Strong Regionally restricted euxassay_011210_07
TS23: hindbrain Strong Regionally restricted euxassay_011210_07
TS23: forebrain Strong Regionally restricted euxassay_011210_07
Specimen euxassay_011210_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Moderate Regionally restricted euxassay_011210_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011210_08
TS23: midbrain Strong Regionally restricted euxassay_011210_08
TS23: hindbrain Strong Regionally restricted euxassay_011210_08
TS23: forebrain Strong Regionally restricted euxassay_011210_08
Specimen euxassay_011210_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_09
TS23: spinal cord Strong Regionally restricted euxassay_011210_09
TS23: midbrain Strong Regionally restricted euxassay_011210_09
TS23: hindbrain Strong Regionally restricted euxassay_011210_09
TS23: forebrain Strong Regionally restricted euxassay_011210_09
Specimen euxassay_011210_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_10
TS23: spinal cord Strong Regionally restricted euxassay_011210_10
TS23: midbrain Strong Regionally restricted euxassay_011210_10
TS23: hindbrain Strong Regionally restricted euxassay_011210_10
TS23: forebrain Strong Regionally restricted euxassay_011210_10
Specimen euxassay_011210_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_11
TS23: spinal cord Strong Regionally restricted euxassay_011210_11
TS23: midbrain Strong Regionally restricted euxassay_011210_11
TS23: hindbrain Strong Regionally restricted euxassay_011210_11
TS23: forebrain Strong Regionally restricted euxassay_011210_11
Specimen euxassay_011210_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_12
TS23: spinal cord Strong Regionally restricted euxassay_011210_12
TS23: midbrain Strong Regionally restricted euxassay_011210_12
TS23: hindbrain Strong Regionally restricted euxassay_011210_12
TS23: forebrain Strong Regionally restricted euxassay_011210_12
Specimen euxassay_011210_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011210_13
TS23: spinal cord Strong Regionally restricted euxassay_011210_13
TS23: midbrain Strong Regionally restricted euxassay_011210_13
TS23: hindbrain Strong Regionally restricted euxassay_011210_13
TS23: forebrain Strong Regionally restricted euxassay_011210_13
Specimen euxassay_011210_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_011210_14
TS23: midbrain Strong Regionally restricted euxassay_011210_14
TS23: hindbrain Strong Regionally restricted euxassay_011210_14
TS23: forebrain Strong Regionally restricted euxassay_011210_14
Specimen euxassay_011210_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_15
TS23: spinal cord Strong Regionally restricted euxassay_011210_15
TS23: midbrain Strong Regionally restricted euxassay_011210_15
TS23: hindbrain Strong Regionally restricted euxassay_011210_15
TS23: forebrain Strong Regionally restricted euxassay_011210_15
Specimen euxassay_011210_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011210_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_16
TS23: vagus ganglion Moderate Regionally restricted euxassay_011210_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_16
TS23: spinal cord Strong Regionally restricted euxassay_011210_16
TS23: midbrain Strong Regionally restricted euxassay_011210_16
TS23: hindbrain Strong Regionally restricted euxassay_011210_16
TS23: forebrain Strong Regionally restricted euxassay_011210_16
Specimen euxassay_011210_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011210_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011210_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_17
TS23: hindbrain Strong Regionally restricted euxassay_011210_17
TS23: midbrain Strong Regionally restricted euxassay_011210_17
TS23: forebrain Strong Regionally restricted euxassay_011210_17
TS23: spinal cord Strong Regionally restricted euxassay_011210_17
Specimen euxassay_011210_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_18
TS23: facial ganglion Strong Regionally restricted euxassay_011210_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011210_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011210_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011210_18
TS23: forebrain Strong Regionally restricted euxassay_011210_18
TS23: hindbrain Strong Regionally restricted euxassay_011210_18
TS23: midbrain Strong Regionally restricted euxassay_011210_18
Specimen euxassay_011210_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011210_19
TS23: facial ganglion Strong Regionally restricted euxassay_011210_19
TS23: forebrain Strong Regionally restricted euxassay_011210_19
TS23: hindbrain Strong Regionally restricted euxassay_011210_19
Specimen euxassay_011210_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011210_20
TS23: forebrain Strong Regionally restricted euxassay_011210_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory