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Gene Expression Data
Assay Details
Assay
Reference: J:130322 Cann GM, et al., Developmental expression of LC3alpha and beta: absence of fibronectin or autophagy phenotype in LC3beta knockout mice. Dev Dyn. 2008 Jan;237(1):187-95
Assay type: RNA in situ
MGI Accession ID: MGI:3776476
Gene symbol: Map1lc3a
Gene name: microtubule-associated protein 1 light chain 3 alpha
Probe: pan LC3 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Assay notes: This probe recognizes both isoforms LC3 alpha and LC3 beta (Map1lc3a and Map1lc3b). Both genes have been annotated.
Results
Specimen 1B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: branchial arch Strong 1B
TS19: dorsal root ganglion Strong 1B
TS19: forebrain Strong 1B
TS19: midbrain Strong 1B
TS19: trigeminal ganglion Strong 1B
TS19: neural tube Strong Regionally restricted 1B Expression is in the commissural neurons in the dorsal neural tube.
TS19: limb Present 1B
TS19: outflow tract Present 1B
Specimen 1C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: heart ventricle Present 1C
TS19: outflow tract Present 1C
Specimen 1D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present 1D
TS20: hindbrain Present 1D
TS20: midbrain Present 1D
TS20: dorsal root ganglion Strong 1D
TS20: sympathetic ganglion Strong Regionally restricted 1D Expression is in the cervical ganglia.
Specimen 1E: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: vibrissa Present 1E
TS20: nasal cavity Present Regionally restricted 1E Expression is at the entrances to the nasal cavities.
Specimen 1F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord lateral wall Present Regionally restricted 1F Expression is in the commissural neurons.
Specimen 1G: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: limb digit Strong 1G
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory