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Gene Expression Data
Assay Details
Assay
Reference: J:116004 Haines BP, et al., Developmentally regulated expression of the LRRTM gene family during mid-gestation mouse embryogenesis. Gene Expr Patterns. 2007 Jan;7(1-2):23-9
Assay type: RNA in situ
MGI Accession ID: MGI:3694268
Gene symbol: Lrrtm3
Gene name: leucine rich repeat transmembrane neuronal 3
Probe: Lrrtm3 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3A: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: future spinal cord neural plate Present Regionally restricted 3A Expression is in the neural progenitors of the anterior neural plate.
TS12: future prosencephalon Present 3A
TS12: future hindbrain Present 3A Expression is in a stripe.
TS12: trunk somite Present Regionally restricted 3A Expression is in the region of the presomitic mesoderm/somite boundary.
TS12: trunk unsegmented mesenchyme Present Regionally restricted 3A Expression is in the region of the presomitic mesoderm/somite boundary.
Specimen 3B: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: future spinal cord neural plate Present Regionally restricted 3B Expression is in the neural progenitors of the anterior neural plate.
Specimen 3C: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: trunk somite Present Regionally restricted 3C Expression is in the region of the presomitic mesoderm/somite boundary.
TS14: trunk unsegmented mesenchyme Present Regionally restricted 3C Expression is in the region of the presomitic mesoderm/somite boundary.
TS14: neural tube Strong Regionally restricted 3C Expression is in the rostral neural tube.
TS14: future hindbrain Weak 3C
TS14: eye Present 3C
TS14: future midbrain Present 3C
TS14: prosencephalon Present 3C
Specimen 3D: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: neural tube Strong Regionally restricted 3D Expression is in the rostral neural tube.
Specimen 3E: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: eye Present 3E
TS14: future midbrain Present 3E
TS14: prosencephalon Present 3E
Specimen 3F: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: trunk somite Present Regionally restricted 3F Expression is in the region of the presomitic mesoderm/somite boundary and in the most recently formed somites.
TS14: trunk unsegmented mesenchyme Present Regionally restricted 3F Expression is in the region of the presomitic mesoderm/somite boundary and in the most recently formed somites.
Specimen 3G: embryonic day 9.0 (more )
Note: An interference contrast image of the tail of the embryo in C.
Structure Level Pattern Image Note
TS14: trunk unsegmented mesenchyme Present Graded 3G The strongest stripe of mesodermal expression was present in the rostral-most presomitic mesoderm at the boundary with the most recently formed somite.
TS14: trunk somite Present Regionally restricted 3G Expression is in the two most recently formed somites.
Specimen 3H: embryonic day 9.0 (more )
Note: An alternate view of the tail of the embryo in C.
Structure Level Pattern Image Note
TS14: trunk somite Present Regionally restricted 3H Expression is in the region of the presomitic mesoderm/somite boundary.
TS14: trunk unsegmented mesenchyme Present Regionally restricted 3H Expression is in the region of the presomitic mesoderm/somite boundary.
Specimen 3I: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: neural tube Present Regionally restricted 3I Expression is in the rostral neural tube.
TS16: future hindbrain Weak 3I
TS16: eye Present 3I
TS16: future forebrain Present 3I
TS16: tail somite Present Regionally restricted 3I Expression is at the presomitic mesoderm/somite boundary.
TS16: tail unsegmented mesenchyme Present Regionally restricted 3I Expression is at the presomitic mesoderm/somite boundary.
Specimen 3J: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: future spinal cord Weak Regionally restricted 3J Expression is in the rostral neural tube.
TS18: hindbrain Weak 3J
TS18: eye Present 3J
TS18: forebrain Present 3J
TS18: hindgut diverticulum Present Regionally restricted 3J Expression is in the epithelium of the hindgut diverticulum.
Specimen 3K: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: future spinal cord Present Regionally restricted 3K Expression is in lateral cells in the rostral neural tube.
Specimen 3L: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: neural tube basal columns Present Regionally restricted 3L Expression is in a medial subset of cells within the motor horn of the interlimb level neural tube.
Specimen 3M: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: tail somite Present Regionally restricted 3M Expression is in the most recently formed somites.
TS18: tail unsegmented mesenchyme Present Regionally restricted 3M Expression is in stripes at the boundary with the somites.
TS18: hindgut diverticulum Present 3M
Specimen 3N: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: tail somite Present Regionally restricted 3N Expression is in the most recently formed somites.
TS18: tail unsegmented mesenchyme Present Regionally restricted 3N Expression is in stripes at the boundary with the somites.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory