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Gene Expression Data
Assay Details
Assay
Reference: J:32705 Ang HL, et al., Retinoic acid synthesis in mouse embryos during gastrulation and craniofacial development linked to class IV alcohol dehydrogenase gene expression. J Biol Chem. 1996 Apr 19;271(16):9526-34
Assay type: RNA in situ
MGI Accession ID: MGI:2384736
Gene symbol: Adh7
Gene name: alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
Probe: mouse class IV ADH cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2A: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Absent 2A Authors report no expression during egg cylinder stage.

Specimen 2B: embryonic day 7.0 (more )
Structure Level Pattern Image Note
TS10: primitive streak Present Regionally restricted 2B Expression first detected during gastrulation in posterior region, i.e. along primitive streak from anterior end (node), posteriorly to allantois.

Specimen 2C: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: primitive streak Present 2C
TS11: extraembryonic component Absent 2C

Specimen 2D: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: primitive streak Present Regionally restricted 2D Expression posteriorly in primitive streak; posterior boundary marked by allantois.
TS12: future hindbrain neural fold Present Regionally restricted 2D Authors report expression anteriorly in neural folds,
TS12: future midbrain neural fold Present Regionally restricted 2D Authors report expression anteriorly in neural folds,
TS12: future prosencephalon neural fold Present Regionally restricted 2D Authors report expression anteriorly in neural folds,

Specimen 2E: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: future hindbrain neural fold Present 2E
TS12: future midbrain neural fold Present 2E
TS12: future prosencephalon neural fold Present 2E

Specimen 2F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Present Regionally restricted 2F Expression in dorsolateral regions of neural folds and craniofacial region, as well as in trunk and caudal neuropore.
TS13: neural ectoderm Present Regionally restricted 2F Expression in dorsolateral regions of neural folds and craniofacial region, as well as in trunk and caudal neuropore.

Specimen 2G: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: future spinal cord neural fold Present Regionally restricted 2G Expression in dorsolateral regions of neural folds.
TS14: embryo Present Regionally restricted 2G Authors report expression in craniofacial region, trunk, and caudal neuropore.

Specimen 2H: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Present Regionally restricted 2H Authors report expression in posterior trunk.
TS15: forelimb bud Present 2H
TS15: head mesenchyme Present Regionally restricted 2H Expression in the head limited to ventral craniofacial structures (eg. frontonasal mass, perioptic region).
TS15: 1st branchial arch mandibular component Present 2H
TS15: 1st branchial arch maxillary component Present 2H
TS15: future brain Absent 2H

Specimen 3A: embryonic day 7.0 (more )
Structure Level Pattern Image Note
TS10: primitive streak Present Regionally restricted 3A Expression localized primarily to primitive streak mesoderm extending from approximately the center of the embryo (node) to the allantois.

Specimen 3B: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: future hindbrain Present Regionally restricted 3B In the neuroepithelium of future forebrain and hindbrain, expression is along the dorsolateral edge nearest to cranial mesenchyme corresponding to site of cranial neural crest migration.
TS12: future prosencephalon Present Regionally restricted 3B In the neuroepithelium of future forebrain and hindbrain, expression is along the dorsolateral edge nearest to cranial mesenchyme corresponding to site of cranial neural crest migration.
TS12: future hindbrain neural crest Present 3B
TS12: future midbrain neural crest Present 3B
TS12: future prosencephalon neural crest Present 3B
TS12: head mesenchyme derived from neural crest Present 3B
TS12: mesenchyme derived from head mesoderm Absent 3B No expression in the midline mesoderm underlying the neural groove.
TS12: foregut diverticulum endoderm Absent 3B

Specimen 3C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future hindbrain Present Regionally restricted 3C Expression in cranial neural folds of forebrain and hindbrain.
TS13: future prosencephalon Present Regionally restricted 3C Expression in cranial neural folds of forebrain and hindbrain.
TS13: head mesenchyme derived from neural crest Present Regionally restricted 3C Expression localized primarily to perioptic neural crest mesenchyme surrounding optic pit.
TS13: 1st branchial arch Present 3C
TS13: 2nd branchial arch Present 3C

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: head mesenchyme Present Regionally restricted 3D Expression in cranial mesenchyme; greater expression in mesenchyme of frontonasal, perioptic and branchial arch regions.
TS15: 1st branchial arch mandibular component Present 3D
TS15: 1st branchial arch maxillary component Present 3D
TS15: 2nd branchial arch Present 3D
TS15: future brain Absent 3D Close to background expression in neuroepithelium of all regions of brain and optic vesicle.
TS15: optic vesicle Absent 3D Close to background expression in neuroepithelium of all regions of brain and optic vesicle.

Specimen 3E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk paraxial mesenchyme Present Regionally restricted 3E Expression in trunk primarily localized to paraxial mesoderm, particularly in the most posterior portion of trunk where somites had not yet formed, as well as in somites posterior to forelimb bud.
TS15: trunk somite Present Regionally restricted 3E Expression in trunk primarily localized to paraxial mesoderm, particularly in the most posterior portion of trunk where somites had not yet formed, as well as in somites posterior to forelimb bud.

Specimen 3F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Present Regionally restricted 3F Expression in forelimb bud localized primarily to proximal rather than distal mesenchyme; no anterior-posterior difference was noted.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory