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AA543401 Pseudogene Detail
Summary
  • Symbol
    AA543401
  • Name
    cDNA sequence, AA543401
  • Synonyms
    Mycs-like
Location &
Maps
more
  • Sequence Map
    Chr9:107070006-107071260 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 57.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2155152
 pseudogene Chr9:107069992-107071260 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014251
 pseudogene Chr9:109039814-109041082 (+)
A/J MGP_AJ_G0014267
 pseudogene Chr9:105073986-105075254 (+)
AKR/J MGP_AKRJ_G0014192
 pseudogene Chr9:107691213-107692481 (+)
BALB/cJ MGP_BALBcJ_G0014217
 pseudogene Chr9:104762075-104763343 (+)
C3H/HeJ MGP_C3HHeJ_G0014048
 pseudogene Chr9:108109128-108110396 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014671
 pseudogene Chr9:112046552-112047820 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012479
 pseudogene Chr9:102536529-102537864 (+)
CAST/EiJ MGP_CASTEiJ_G0013702
 pseudogene Chr9:108043456-108044724 (+)
CBA/J MGP_CBAJ_G0014030
 pseudogene Chr9:116018253-116019521 (+)
DBA/2J MGP_DBA2J_G0014115
 pseudogene Chr9:104539583-104540851 (+)
FVB/NJ MGP_FVBNJ_G0014113
 pseudogene Chr9:103303568-103304836 (+)
LP/J MGP_LPJ_G0014205
 pseudogene Chr9:109244588-109245856 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0014148
 pseudogene Chr9:117592319-117593587 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014641
 pseudogene Chr9:107970271-107971539 (+)
PWK/PhJ MGP_PWKPhJ_G0013516
 pseudogene Chr9:104853607-104854875 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013306
 pseudogene Chr9:108043164-108044436 (+)
WSB/EiJ MGP_WSBEiJ_G0013763
 pseudogene Chr9:107866440-107867708 (+)



Homology
less
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100417434 NCBI Gene Model | MGI Sequence Detail 1255 C57BL/6J ±  kb
transcript NR_102273 RefSeq | MGI Sequence Detail 1255 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 4
    Primer pair 2
References
more
  • Summaries
    All 7
  • Earliest
    J:71144 Yamasaki Y, et al., Mouse chromosome 19 and distal rat chromosome 1: a chromosome segment conserved in evolution. Hereditas. 2001;134(1):23-34
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory