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Gene Expression Data
Assay Details
Assay
Reference: J:32084 Murphy P, et al., Expression of the mouse labial-like homeobox-containing genes, Hox 2.9 and Hox 1.6, during segmentation of the hindbrain. Development. 1991 Jan;111(1):61-74
Assay type: RNA in situ
MGI Accession ID: MGI:1927831
Gene symbol: Hoxa1
Gene name: homeobox A1
Probe: Hox-1.6 cDNA 1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 3. C.: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 3C Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
TS11: neural ectoderm Present Regionally restricted 3C Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
TS11: primitive streak Present Regionally restricted 3C Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.

Specimen 4. B.: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: embryo mesenchyme Strong Regionally restricted 4B Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: future hindbrain Strong Regionally restricted 4B Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: future hindbrain neural ectoderm Strong Regionally restricted 4B Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: neural ectoderm Strong Regionally restricted 4B Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: pre-otic sulcus Strong Regionally restricted 4B Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.

Specimen 4. F.: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube Present 4F
TS13: trunk unsegmented mesenchyme Present 4F
TS13: foregut diverticulum Present Regionally restricted 4F Expression is detected in the lateral plate mesoderm up to the posterior hindbrain and the epithelium of the foregut.
TS13: lateral plate mesoderm Present Regionally restricted 4F Expression is detected in the lateral plate mesoderm up to the posterior hindbrain and the epithelium of the foregut.
TS13: future hindbrain Absent 4F

Specimen 5. C.: embryonic day 8.75 (more )
Structure Level Pattern Image Note
TS14: mesenchyme derived from lateral plate Present Regionally restricted 5C Expression detected in the lateral plate mesoderm as far as the anterior headfold.
TS14: trunk unsegmented mesenchyme Present 5C
TS14: trunk somite Weak 5C

Specimen 5. F.: embryonic day 8.75 (more )
Structure Level Pattern Image Note
TS14: mesenchyme derived from lateral plate Present Regionally restricted 5F Expression detected in the lateral plate mesoderm as far as the anterior headfold.
TS14: trunk unsegmented mesenchyme Present 5F
TS14: trunk somite Weak 5F

Specimen 5. I.: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: gut Present Regionally restricted 5I Expression is detected in the gut epithelium at the level of the forelimb bud and gut associated mesoderm at and below the level of the heart.
TS15: tail unsegmented mesenchyme Present 5I

Specimen 5. L.: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: gut Present Regionally restricted 5L Expression is detected in the gut epithelium at the level of the forelimb bud, gut associated mesoderm at and below the level of the heart, surface ectoderm adjacent to labelled gut associated mesoderm.
TS15: neural tube Present Regionally restricted 5L Expression is detected in the gut epithelium at the level of the forelimb bud, gut associated mesoderm at and below the level of the heart, surface ectoderm adjacent to labelled gut associated mesoderm.
TS15: surface ectoderm Present Regionally restricted 5L Expression is detected in the gut epithelium at the level of the forelimb bud, gut associated mesoderm at and below the level of the heart, surface ectoderm adjacent to labelled gut associated mesoderm.
TS15: nephric duct Present 5L
TS15: tail unsegmented mesenchyme Present 5L

Specimen 7. C.: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo mesenchyme Weak 7C

Specimen 7. F.: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: embryo mesenchyme Absent 7F

Specimen E 12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: embryo Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory