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Ajm1 Gene Detail
Summary
  • Symbol
    Ajm1
  • Name
    apical junction component 1
  • Synonyms
    Gm996, LOC381353
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685842
    NCBI Gene: 381353
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25465428-25471760 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 17.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685842
 protein coding gene Chr2:25465428-25471769 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025457
 protein coding gene Chr2:23478224-23484565 (-)
A/J MGP_AJ_G0025434
 protein coding gene Chr2:22563816-22570163 (-)
AKR/J MGP_AKRJ_G0025404
 protein coding gene Chr2:23332532-23338879 (-)
BALB/cJ MGP_BALBcJ_G0025430
 protein coding gene Chr2:22684636-22690977 (-)
C3H/HeJ MGP_C3HHeJ_G0025191
 protein coding gene Chr2:23263240-23269581 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025874
 protein coding gene Chr2:24216879-24223220 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023285
 protein coding gene Chr2:21474545-21480934 (-)
CAST/EiJ MGP_CASTEiJ_G0024654
 protein coding gene Chr2:23130101-23136542 (-)
CBA/J MGP_CBAJ_G0025169
 protein coding gene Chr2:25057509-25063850 (-)
DBA/2J MGP_DBA2J_G0025302
 protein coding gene Chr2:22404897-22411244 (-)
FVB/NJ MGP_FVBNJ_G0025264
 protein coding gene Chr2:22152168-22163972 (-)
LP/J MGP_LPJ_G0025388
 protein coding gene Chr2:23415722-23422063 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025295
 protein coding gene Chr2:25250497-25256844 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025933
 protein coding gene Chr2:23273369-23279710 (-)
PWK/PhJ MGP_PWKPhJ_G0024402
 protein coding gene Chr2:22225690-22232037 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024202
 protein coding gene Chr2:23416593-23423025 (-)
WSB/EiJ MGP_WSBEiJ_G0024723
 protein coding gene Chr2:23343617-23349956 (-)



Homology
more
  • Human Ortholog
    AJM1, apical junction component 1 homolog
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    AJM1, apical junction component 1 homolog
  • Synonyms
    ajm-1, C9orf172
  • Links
    NCBI Gene ID: 389813
    neXtProt AC: NX_C9J069
    UniProt: C9J069

  • Chr Location
    9q34.3; chr9:136842478-136848801 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381353 NCBI Gene Model | MGI Sequence Detail 6333 C57BL/6J ±  kb
transcript NM_001005424 RefSeq | MGI Sequence Detail 4901 C57BL/6  
polypeptide A2AJA9 UniProt | EBI | MGI Sequence Detail 974 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 6
References
more
  • Summaries
    All 18
    Gene Ontology 2
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory